RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ADMP35318 185 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 HAGHQ16775 308 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 IZUMO4Q1ZYL8 232 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 TM4SF20Q53R12 229 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 TMEM61Q8N0U2 210 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 SCARB1Q8WTV0 552 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 WDR89Q96FK6 387 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 TSC22D3Q99576 134 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 WFDC10AQ9H1F0 79 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 TECRQ9NZ01 308 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 SNAPC5O75971 98 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 PIGPP57054 158 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 IL18Q14116 193 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 OR2C3Q8N628 320 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 SMIM4Q8WVI0 70 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 CHRDL1Q9BU40 450 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 HINT2Q9BX68 163 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 SLIRPQ9GZT3 109 aaKnown RBP14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 THYN1Q9P016 225 aa14.89□□□□□ -0.03
PDZRN3-202ENST00000308537 IGHV3-21A0A0B4J1V1 117 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 IGHV3-35A0A0C4DH35 117 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 S100A5P33763 92 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 TAS2R19P59542 299 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 PRCDQ00LT1 54 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 FAM106AQ4KMX7 169 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 SLC25A24Q6NUK1 477 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 FAAP20Q6NZ36 180 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 GTSCR1Q86UQ5 136 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 UXS1Q8NBZ7 420 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 ZNF114Q8NC26 417 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 TERB2Q8NHR7 220 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 DYNLRB2Q8TF09 96 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 TMEM190Q8WZ59 177 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 ATP6V0BQ99437 205 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 NEURL2Q9BR09 285 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 EDA2RQ9HAV5 297 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 PLEKHA3Q9HB20 300 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 FKBP11Q9NYL4 201 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 NDUFA13Q9P0J0 144 aa14.88□□□□□ -0.03
PDZRN3-202ENST00000308537 A0A0B4J293 547 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 ZNF320A2RRD8 509 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 CTDSPLO15194 276 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 PPP5CP53041 499 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 CD81P60033 236 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 STEAP1BQ6NZ63 245 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 PLET1Q6UQ28 207 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 OR13C8Q8NGS7 320 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 OR1P1Q8NH06 330 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 SOSTQ9BQB4 213 aa14.87□□□□□ -0.03
PDZRN3-202ENST00000308537 A0A0G2JRQ6 117 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 RBMY1BA6NDE4 496 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 RBMY1EA6NEQ0 496 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 FABP12A6NFH5 140 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 OR2T8A6NH00 312 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 I3L2K1 104 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 RAB3DO95716 219 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 RBMY1DP0C7P1 496 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 ELLP55199 621 aaPredicted RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 HSPE1P61604 102 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 H2BFWTQ7Z2G1 175 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 BSCL2Q96G97 398 aaPredicted RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 TMEM56Q96MV1 263 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 CITED4Q96RK1 184 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 NXF2Q9GZY0 626 aaKnown RBP14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 ZMAT4Q9H898 229 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 C21orf62Q9NYP8 219 aa14.86□□□□□ -0.03
PDZRN3-202ENST00000308537 CTSGP08311 255 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 PGAM2P15259 253 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 UCP1P25874 307 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 MEF2DQ14814 521 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 PVRIGQ6DKI7 326 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 BTNL8Q6UX41 500 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 DEFB125Q8N687 156 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 MARCH1Q8TCQ1 289 aa14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 RTBDNQ9BSG5 229 aaPredicted RBP14.85□□□□□ -0.03
PDZRN3-202ENST00000308537 TENM2Q9NT68 2774 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 C3orf85A0A1B0GTC6 90 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 INS-IGF2F8WCM5 200 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 C3orf84H3BNL1 204 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 CTSDP07339 412 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 FCGR2BP31994 310 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 TNFSF8P32971 234 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 SP6Q3SY56 376 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 ZNF57Q68EA5 555 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 OR4C16Q8NGL9 310 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 OR1L6Q8NGR2 347 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 OR4A16Q8NH70 328 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 MUC7Q8TAX7 377 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 MARC2Q969Z3 335 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 RBM38Q9H0Z9 239 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 C5orf66Q9H5L9 145 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 SLC2A8Q9NY64 477 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 MRPL27Q9P0M9 148 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 LYSTQ99698 3801 aa14.84□□□□□ -0.03
PDZRN3-202ENST00000308537 CYB5BO43169 146 aa14.83□□□□□ -0.04
PDZRN3-202ENST00000308537 GUCA2BQ16661 112 aa14.83□□□□□ -0.04
PDZRN3-202ENST00000308537 SPSB3Q6PJ21 355 aa14.83□□□□□ -0.04
PDZRN3-202ENST00000308537 Q6ZRM9 215 aa14.83□□□□□ -0.04
PDZRN3-202ENST00000308537 LHFPL5Q8TAF8 219 aa14.83□□□□□ -0.04
PDZRN3-202ENST00000308537 OR11H12B2RN74 326 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms