RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 FAM71F2Q6NXP2 309 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 COLCA1Q6ZS62 124 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 GATAD1Q8WUU5 269 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 STAG3L2P0CL84 134 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 CACNA1DQ01668 2161 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 SAA1P0DJI8 122 aaPredicted RBP15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 WBP1Q96G27 269 aa15.68■□□□□ 0.1
SMARCC1-201ENST00000254480 PRR32B1ATL7 298 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 COX6CP09669 75 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 ZNF883P0CG24 379 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 TMEM238LA0A1B0GVL6 79 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 A6NJY4 79 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 HLA-DRB1P01911 266 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 ARID2Q68CP9 1835 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 NR2C2APQ86WQ0 139 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 GP6Q9HCN6 339 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 ZNF319Q9P2F9 582 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 CFHR1Q03591 330 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 OSR1Q8TAX0 266 aaPredicted RBP15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 CHRNA10Q9GZZ6 450 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 OR52E5Q8NH55 327 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 SEMA5BQ9P283 1151 aa15.67■□□□□ 0.1
SMARCC1-201ENST00000254480 HBBP68871 147 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 LBHQ53QV2 105 aaPredicted RBP15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 LINC00114Q6XXX2 140 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 HIST1H2BAQ96A08 127 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 COL25A1Q9BXS0 654 aaPredicted RBP15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 FABP2P12104 132 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 NEU4Q8WWR8 484 aaPredicted RBP15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 LINC01587Q99440 93 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 FOXD3Q9UJU5 478 aaPredicted RBP15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 PATJQ8NI35 1801 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 IQCF6A8MYZ5 107 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 TEX29Q8N6K0 151 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 TOMM7Q9P0U1 55 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 PQLC2LA1A4F0 135 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 MRAP2Q96G30 205 aa15.66■□□□□ 0.1
SMARCC1-201ENST00000254480 IGLV3-19P01714 112 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 SLC25A34Q6PIV7 304 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 NPIPB7O75200 414 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 FLVCR1-AS1Q8TAF5 88 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 ZNF236Q9UL36 1845 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 PRR31Q5SQ13 230 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 SPACA3Q8IXA5 215 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 TNFRSF18Q9Y5U5 241 aa15.65■□□□□ 0.1
SMARCC1-201ENST00000254480 PEX7O00628 323 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 IGKV1-9A0A0C4DH69 117 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 TM4SF5O14894 197 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 SRSF6Q13247 344 aaKnown RBP15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 GREB1Q4ZG55 1949 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 PSME4Q14997 1843 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 DEFB104AQ8WTQ1 72 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 ASIPP42127 132 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 PLP1P60201 277 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 GFI1BQ5VTD9 330 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 FAM19A2Q8N3H0 131 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 IGHV1-18A0A0C4DH31 117 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 SELLP14151 372 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 PPIFP30405 207 aaKnown RBP15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 C14orf144Q96I85 54 aa15.64■□□□□ 0.09
SMARCC1-201ENST00000254480 J3QW42 95 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 PMCHL1Q16048 86 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 PRELID3AQ96N28 172 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 APOHP02749 345 aaPredicted RBP15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 C1orf162Q8NEQ5 155 aaPredicted RBP15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 C19orf24Q9BVV8 132 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 OR4X2Q8NGF9 303 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 Q9H3A6 140 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 CD8AP01732 235 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 UCP1P25874 307 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 CIRBPQ14011 172 aaKnown RBP15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 SAPCD1Q5SSQ6 148 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 LINC00312Q9Y6C7 94 aa15.63■□□□□ 0.09
SMARCC1-201ENST00000254480 COTL1Q14019 142 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 REC114Q7Z4M0 266 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 FOXC2Q99958 501 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 UQCR10Q9UDW1 63 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 CD33P20138 364 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 RAB9AP51151 201 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 TMEM136Q6ZRR5 245 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 RNASE7Q9H1E1 156 aaKnown RBP15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 NUTF2P61970 127 aaKnown RBP15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 NSUN5P1Q3KNT7 163 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 ZIC4Q8N9L1 334 aa15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 RNASE6Q93091 150 aaKnown RBP15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 PSMG3Q9BT73 122 aaPredicted RBP15.62■□□□□ 0.09
SMARCC1-201ENST00000254480 FER1L5A0AVI2 2057 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 TMEM30BQ3MIR4 351 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 C3orf36Q3SXR2 165 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 TRGV2A0A075B6R0 118 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 FBLN7Q53RD9 439 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 TMEM70Q9BUB7 260 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 PYYP10082 97 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 TBR1Q16650 682 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 MRPL13Q9BYD1 178 aaKnown RBP15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 TRAV40A0A0B4J280 105 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 ZNF506Q5JVG8 444 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 TCF23Q7RTU1 214 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 C5orf24Q7Z6I8 188 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms