RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 DEFB114Q30KQ6 69 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 PHLDA2Q53GA4 152 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 GDPD1Q8N9F7 314 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 LSM10Q969L4 123 aaKnown RBP14.36□□□□□ -0.11
CLN6-221ENST00000637494 TMEM56Q96MV1 263 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 NEURL2Q9BR09 285 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 PRNDQ9UKY0 176 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 OR51B2Q9Y5P1 312 aa14.36□□□□□ -0.11
CLN6-221ENST00000637494 MFSD2BA6NFX1 497 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 SERPINE2P07093 398 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 PTBP1P26599 531 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLN6-221ENST00000637494 SLC25A24Q6NUK1 477 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 PLET1Q6UQ28 207 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 SLC38A6Q8IZM9 456 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 CADM3Q8N126 398 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 OR10W1Q8NGF6 305 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 C15orf40Q8WUR7 153 aa14.35□□□□□ -0.11
CLN6-221ENST00000637494 THAP7Q9BT49 309 aaPredicted RBP14.35□□□□□ -0.11
CLN6-221ENST00000637494 FAM212BQ9NTI7 297 aaPredicted RBP14.35□□□□□ -0.11
CLN6-221ENST00000637494 ZNF182P17025 639 aaPredicted RBP14.34□□□□□ -0.11
CLN6-221ENST00000637494 CBLN1P23435 193 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 GPR183P32249 361 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 UCP3P55916 312 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 ZNF57Q68EA5 555 aaPredicted RBP14.34□□□□□ -0.11
CLN6-221ENST00000637494 ADAMTSL5Q6ZMM2 481 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 TBC1D26Q86UD7 250 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 OR1L6Q8NGR2 347 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 OR5B3Q8NH48 314 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 VN1R17PQ8TDU5 208 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 MARC2Q969Z3 335 aa14.34□□□□□ -0.11
CLN6-221ENST00000637494 A8MWP6 167 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 GABARAPO95166 117 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 LYL1P12980 280 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 HAGHQ16775 308 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 ZNF585BQ52M93 769 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 GPR107Q5VW38 600 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 SLC16A13Q7RTY0 426 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 ZNF502Q8TBZ5 544 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 CITED4Q96RK1 184 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 PLEKHA3Q9HB20 300 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 ZC4H2Q9NQZ6 224 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 NDUFA4L2Q9NRX3 87 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 NSG2Q9Y328 171 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 UFC1Q9Y3C8 167 aa14.33□□□□□ -0.12
CLN6-221ENST00000637494 ZNF785A8K8V0 405 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 PGAM2P15259 253 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 ANKRD55Q3KP44 614 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 RNASE12Q5GAN4 147 aaKnown RBP14.32□□□□□ -0.12
CLN6-221ENST00000637494 RNASE10Q5GAN6 216 aaKnown RBP14.32□□□□□ -0.12
CLN6-221ENST00000637494 H2BFWTQ7Z2G1 175 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 OR4A16Q8NH70 328 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 ISOC1Q96CN7 298 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 EXTL2Q9UBQ6 330 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 F11RQ9Y624 299 aaKnown RBP14.32□□□□□ -0.12
CLN6-221ENST00000637494 CEPT1Q9Y6K0 416 aa14.32□□□□□ -0.12
CLN6-221ENST00000637494 TENM3Q9P273 2699 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 M0QYG6 137 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 TGOLN2O43493 480 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 ELLP55199 621 aaPredicted RBP14.31□□□□□ -0.12
CLN6-221ENST00000637494 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 CTF1Q16619 201 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 GPR141Q7Z602 305 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 UXS1Q8NBZ7 420 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 CACNG8Q8WXS5 425 aa14.31□□□□□ -0.12
CLN6-221ENST00000637494 BSCL2Q96G97 398 aaPredicted RBP14.31□□□□□ -0.12
CLN6-221ENST00000637494 MRPS26Q9BYN8 205 aaKnown RBP14.31□□□□□ -0.12
CLN6-221ENST00000637494 NAA50Q9GZZ1 169 aaKnown RBP14.31□□□□□ -0.12
CLN6-221ENST00000637494 TMEM213A2RRL7 107 aa14.3□□□□□ -0.12
CLN6-221ENST00000637494 C15orf61A6NNL5 157 aa14.3□□□□□ -0.12
CLN6-221ENST00000637494 OR11H12B2RN74 326 aa14.3□□□□□ -0.12
CLN6-221ENST00000637494 TBPP20226 339 aa14.3□□□□□ -0.12
CLN6-221ENST00000637494 SPSB3Q6PJ21 355 aa14.3□□□□□ -0.12
CLN6-221ENST00000637494 RBPMS2Q6ZRY4 209 aaKnown RBP14.3□□□□□ -0.12
CLN6-221ENST00000637494 WDR89Q96FK6 387 aaPredicted RBP14.3□□□□□ -0.12
CLN6-221ENST00000637494 ZNF486Q96H40 463 aaPredicted RBP14.3□□□□□ -0.12
CLN6-221ENST00000637494 ATP6V0BQ99437 205 aa14.3□□□□□ -0.12
CLN6-221ENST00000637494 GAR1Q9NY12 217 aaKnown RBP14.3□□□□□ -0.12
CLN6-221ENST00000637494 MRPL27Q9P0M9 148 aaKnown RBP14.3□□□□□ -0.12
CLN6-221ENST00000637494 OR2T8A6NH00 312 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 RGS5O15539 181 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 ATG12O94817 140 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 CD7P09564 240 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 SMIM18P0DKX4 95 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 EDN2P20800 178 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 TM4SF20Q53R12 229 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 CASC10Q5T4H9 136 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 ARRDC1Q8N5I2 433 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 OR52B4Q8NGK2 314 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 TMEM14BQ9NUH8 114 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 C21orf62Q9NYP8 219 aa14.29□□□□□ -0.12
CLN6-221ENST00000637494 TRAV25A0A0B4J276 109 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 IGHV3-35A0A0C4DH35 117 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 Q56UQ5 140 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 BTNL8Q6UX41 500 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 TMEM61Q8N0U2 210 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 DEFB125Q8N687 156 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 UBAC2Q8NBM4 344 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 OR52I2Q8NH67 350 aa14.28□□□□□ -0.12
CLN6-221ENST00000637494 SEC22AQ96IW7 307 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms