RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 THYN1Q9P016 225 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 NSG2Q9Y328 171 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 HUWE1Q7Z6Z7 4374 aaKnown RBP11.4□□□□□ -0.58
LIG1-215ENST00000597901 M0QYG6 137 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 CBLN1P23435 193 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
LIG1-215ENST00000597901 S100GP29377 79 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 SLC25A24Q6NUK1 477 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 HSD17B13Q7Z5P4 300 aaPredicted RBP11.39□□□□□ -0.59
LIG1-215ENST00000597901 TBC1D26Q86UD7 250 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 ZNF502Q8TBZ5 544 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 HINT2Q9BX68 163 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 TUBA4BQ9H853 241 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 FAM212BQ9NTI7 297 aaPredicted RBP11.39□□□□□ -0.59
LIG1-215ENST00000597901 TECRQ9NZ01 308 aaKnown RBP11.39□□□□□ -0.59
LIG1-215ENST00000597901 KLK11Q9UBX7 282 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 OR51B2Q9Y5P1 312 aa11.39□□□□□ -0.59
LIG1-215ENST00000597901 CYB5BO43169 146 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 TPPPO94811 219 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 ALDH3B2P48448 385 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 RNASE12Q5GAN4 147 aaKnown RBP11.38□□□□□ -0.59
LIG1-215ENST00000597901 SLC38A6Q8IZM9 456 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 GDPD1Q8N9F7 314 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 OR52I2Q8NH67 350 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 VN1R17PQ8TDU5 208 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 ABHD1Q96SE0 405 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
LIG1-215ENST00000597901 ZC4H2Q9NQZ6 224 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 FKBP11Q9NYL4 201 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 EXTL2Q9UBQ6 330 aa11.38□□□□□ -0.59
LIG1-215ENST00000597901 TENM3Q9P273 2699 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 IFNA6P05013 189 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 HAGHQ16775 308 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 PLET1Q6UQ28 207 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 GPR141Q7Z602 305 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 LAX1Q8IWV1 398 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 UXS1Q8NBZ7 420 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 NEURL2Q9BR09 285 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 MTFP1Q9UDX5 166 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
LIG1-215ENST00000597901 TMEM213A2RRL7 107 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 DBX1A6NMT0 343 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 IGKV1-39P01597 117 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 CD3DP04234 171 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 IGKV1D-39P04432 117 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 GPR183P32249 361 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 MFAP2P55001 183 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 GUCA2BQ16661 112 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 TM4SF20Q53R12 229 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 UNQ9165/PRO28630Q6UXU0 137 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 MUC7Q8TAX7 377 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 C15orf40Q8WUR7 153 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 CACNG8Q8WXS5 425 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 LSM10Q969L4 123 aaKnown RBP11.36□□□□□ -0.59
LIG1-215ENST00000597901 SEC22AQ96IW7 307 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 TMEM56Q96MV1 263 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 TSC22D3Q99576 134 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 MIXL1Q9H2W2 232 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 PALMDQ9NP74 551 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 SLC2A8Q9NY64 477 aa11.36□□□□□ -0.59
LIG1-215ENST00000597901 F11RQ9Y624 299 aaKnown RBP11.36□□□□□ -0.59
LIG1-215ENST00000597901 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 CTDSP2O14595 271 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 CD7P09564 240 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 CD81P60033 236 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 RNASE10Q5GAN6 216 aaKnown RBP11.35□□□□□ -0.59
LIG1-215ENST00000597901 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
LIG1-215ENST00000597901 H2BFWTQ7Z2G1 175 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 WDR89Q96FK6 387 aaPredicted RBP11.35□□□□□ -0.59
LIG1-215ENST00000597901 TMEM14BQ9NUH8 114 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 MLXQ9UH92 298 aa11.35□□□□□ -0.59
LIG1-215ENST00000597901 IGHV3-21A0A0B4J1V1 117 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 A8MWP6 167 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 TGOLN2O43493 480 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 C8orf88P0DMB2 117 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 PGAM2P15259 253 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 PI3P19957 117 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 RND3P61587 244 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 SPCS2Q15005 226 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 ZNF57Q68EA5 555 aaPredicted RBP11.34□□□□□ -0.59
LIG1-215ENST00000597901 ARRDC1Q8N5I2 433 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 TMEM229BQ8NBD8 167 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 OR1L6Q8NGR2 347 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 SCARB1Q8WTV0 552 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 ZNF486Q96H40 463 aaPredicted RBP11.34□□□□□ -0.59
LIG1-215ENST00000597901 CITED4Q96RK1 184 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 ZNF436Q9C0F3 470 aaPredicted RBP11.34□□□□□ -0.59
LIG1-215ENST00000597901 PLEKHA3Q9HB20 300 aa11.34□□□□□ -0.59
LIG1-215ENST00000597901 MRPL27Q9P0M9 148 aaKnown RBP11.34□□□□□ -0.59
LIG1-215ENST00000597901 KMT2CQ8NEZ4 4911 aaKnown RBP11.33□□□□□ -0.6
LIG1-215ENST00000597901 OR2T8A6NH00 312 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms