RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 VAMP2P63027 116 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 RELBQ01201 579 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 TNFRSF9Q07011 255 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 EBI3Q14213 229 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 IZUMO4Q1ZYL8 232 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 VMA21Q3ZAQ7 101 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 SSX9Q7RTT3 188 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.9
DDX39A-219ENST00000592927 KCNRGQ8N5I3 272 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-219ENST00000592927 AQP10Q96PS8 301 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 TSNAXQ99598 290 aaKnown RBP9.46□□□□□ -0.9
DDX39A-219ENST00000592927 SLC25A33Q9BSK2 321 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 C11orf1Q9H5F2 150 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 FKBP11Q9NYL4 201 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 PRNDQ9UKY0 176 aa9.46□□□□□ -0.9
DDX39A-219ENST00000592927 FOXA2Q9Y261 457 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-219ENST00000592927 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
DDX39A-219ENST00000592927 UPK2O00526 184 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 CHST1O43916 411 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 SPDEFO95238 335 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 CXCL2P19875 107 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 RPL15P61313 204 aaKnown RBP9.45□□□□□ -0.9
DDX39A-219ENST00000592927 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
DDX39A-219ENST00000592927 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 VKORC1L1Q8N0U8 176 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 TEX45Q8NA69 505 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 RBM14Q96PK6 669 aaKnown RBP9.45□□□□□ -0.9
DDX39A-219ENST00000592927 CIB3Q96Q77 187 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-219ENST00000592927 GON7Q9BXV9 100 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 WSB1Q9Y6I7 421 aa9.45□□□□□ -0.9
DDX39A-219ENST00000592927 RNF222A6NCQ9 220 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 NCBP2LA6PVI3 153 aaKnown RBP9.44□□□□□ -0.9
DDX39A-219ENST00000592927 SSSCA1O60232 199 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 KBTBD11O94819 623 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 IGLV2-23P01705 113 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 SAA1P0DJI8 122 aaPredicted RBP9.44□□□□□ -0.9
DDX39A-219ENST00000592927 RPL12P30050 165 aaKnown RBP9.44□□□□□ -0.9
DDX39A-219ENST00000592927 SPCS3P61009 180 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 OR2C3Q8N628 320 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 Q8N6K4 173 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 OR8H1Q8NGG4 311 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 TMEM167AQ8TBQ9 72 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 SMIM8Q96KF7 97 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 NPFFR1Q9GZQ6 430 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 SLC25A31Q9H0C2 315 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 RBKSQ9H477 322 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 LYRM2Q9NU23 88 aaPredicted RBP9.44□□□□□ -0.9
DDX39A-219ENST00000592927 TMEM14BQ9NUH8 114 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 C1RLQ9NZP8 487 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 ZNF257Q9Y2Q1 563 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 MOB4Q9Y3A3 225 aa9.44□□□□□ -0.9
DDX39A-219ENST00000592927 TET2Q6N021 2002 aaPredicted RBP9.44□□□□□ -0.9
DDX39A-219ENST00000592927 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 KANTRA0A1W2PQU2 76 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 M0QZK8 103 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 TAAR5O14804 337 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 TSC22D2O75157 780 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 SCAF4O95104 1147 aaKnown RBP9.43□□□□□ -0.9
DDX39A-219ENST00000592927 IFNA17P01571 189 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 HSPE1P61604 102 aaKnown RBP9.43□□□□□ -0.9
DDX39A-219ENST00000592927 OPCMLQ14982 345 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 OR5B3Q8NH48 314 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 RBMXL1Q96E39 390 aaKnown RBP9.43□□□□□ -0.9
DDX39A-219ENST00000592927 CLCC1Q96S66 551 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
DDX39A-219ENST00000592927 SLA2Q9H6Q3 261 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 ZC4H2Q9NQZ6 224 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 BOLA1Q9Y3E2 137 aa9.43□□□□□ -0.9
DDX39A-219ENST00000592927 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 CEBPZOSA8MTT3 80 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 BCL2L11O43521 198 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 CRYGBP07316 175 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 MAS1LP35410 378 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 AP2S1P53680 142 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-219ENST00000592927 F2RL1P55085 397 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 PAX9P55771 341 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 OR2B8PP59922 312 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 RPL8P62917 257 aaKnown RBP9.42□□□□□ -0.9
DDX39A-219ENST00000592927 RPP30P78346 268 aaKnown RBP9.42□□□□□ -0.9
DDX39A-219ENST00000592927 BAXQ07812 192 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 PSG5Q15238 335 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 MMDQ15546 238 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 MMD2Q8IY49 270 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 NPBQ8NG41 125 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
DDX39A-219ENST00000592927 RITA1Q96K30 269 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 PSENENQ9NZ42 101 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 KIAA1456Q9P272 454 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 OR51B2Q9Y5P1 312 aa9.42□□□□□ -0.9
DDX39A-219ENST00000592927 EPPK1P58107 5090 aaKnown RBP9.42□□□□□ -0.9
DDX39A-219ENST00000592927 MSGN1A6NI15 193 aa9.41□□□□□ -0.9
DDX39A-219ENST00000592927 NBR2O15453 112 aa9.41□□□□□ -0.9
DDX39A-219ENST00000592927 FGF16O43320 207 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms