RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 STAG3L2P0CL84 134 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 STAG3L3P0CL85 134 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 B2MP61769 119 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 VKORC1Q9BQB6 163 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 DYNLRB1Q9NP97 96 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 BET1LQ9NYM9 111 aa15.09■□□□□ 0.01
PRPF40B-208ENST00000548436 H0YJW9 148 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 DVL1O14640 695 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 COL8A2P25067 703 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 REG1BP48304 166 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 LRRC10Q5BKY1 277 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 SPNS3Q6ZMD2 512 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 STPG3Q8N7X2 389 aa15.08■□□□□ 0.01
PRPF40B-208ENST00000548436 TRBV24-1A0A075B6N3 115 aa15.08■□□□□ 0
PRPF40B-208ENST00000548436 IGFBP2P18065 325 aa15.08■□□□□ 0
PRPF40B-208ENST00000548436 GNB1P62873 340 aa15.08■□□□□ 0
PRPF40B-208ENST00000548436 DIAPH2-AS1Q14236 149 aa15.08■□□□□ 0
PRPF40B-208ENST00000548436 CST9LP1Q5W188 147 aa15.08■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BKO60814 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BJP06899 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BOP23527 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 LOXP28300 417 aaPredicted RBP15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BBP33778 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BDP58876 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BCP62807 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST2H2BEQ16778 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.07■□□□□ 0
PRPF40B-208ENST00000548436 OR5AN1Q8NGI8 311 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 OSR1Q8TAX0 266 aaPredicted RBP15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BHQ93079 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BNQ99877 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HIST1H2BMQ99879 126 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 SEPSECSQ9HD40 501 aaKnown RBP15.07■□□□□ 0
PRPF40B-208ENST00000548436 DOK5Q9P104 306 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 CLN5O75503 358 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 APOA2P02652 100 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 PFN1P07737 140 aaKnown RBP15.07■□□□□ 0
PRPF40B-208ENST00000548436 NDUFA6P56556 154 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 EFNB3Q15768 340 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 SPATA31B1PQ5VZV4 182 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 SLC16A13Q7RTY0 426 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 MOB3BQ86TA1 216 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 HARBI1Q96MB7 349 aa15.07■□□□□ 0
PRPF40B-208ENST00000548436 PDE6DO43924 150 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 CXorf1O96002 111 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 PLAUP00749 431 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 HOXA5P20719 270 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 RPL29P47914 159 aaKnown RBP15.06■□□□□ 0
PRPF40B-208ENST00000548436 DLX6P56179 175 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 NECAP1Q8NC96 275 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 OR10W1Q8NGF6 305 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 KCNIP2Q9NS61 270 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 FKBP11Q9NYL4 201 aa15.06■□□□□ 0
PRPF40B-208ENST00000548436 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.05■□□□□ 0
PRPF40B-208ENST00000548436 FNDC10F2Z333 226 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 SMIM6P0DI80 62 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 CHRNB4P30926 498 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 APOBEC3AP31941 199 aaPredicted RBP15.05■□□□□ 0
PRPF40B-208ENST00000548436 PRR20EP86478 221 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 PRR20CP86479 221 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 PRR20DP86480 221 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 PRR20BP86481 221 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 PRR20AP86496 221 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 OR10X1Q8NGY0 326 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 ZNF596Q8TC21 504 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 DERL1Q9BUN8 251 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 KAAG1Q9UBP8 84 aa15.05■□□□□ 0
PRPF40B-208ENST00000548436 PHOX2AO14813 284 aa15.05■□□□□ -0
PRPF40B-208ENST00000548436 NDUFB4O95168 129 aa15.05■□□□□ -0
PRPF40B-208ENST00000548436 RAB31Q13636 194 aa15.05■□□□□ -0
PRPF40B-208ENST00000548436 TMEM177Q53S58 311 aa15.05■□□□□ -0
PRPF40B-208ENST00000548436 OR5B3Q8NH48 314 aa15.05■□□□□ -0
PRPF40B-208ENST00000548436 FRZBQ92765 325 aa15.05■□□□□ -0
PRPF40B-208ENST00000548436 IGKV1OR2-108A0A075B7D4 117 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 IGHV1-69-2A0A0G2JMI3 117 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 VENTXO95231 258 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 LINC00869P0C866 280 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 RNASE2P10153 161 aaKnown RBP15.04■□□□□ -0
PRPF40B-208ENST00000548436 C2orf83Q53S99 150 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 LINC00311Q8N616 119 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 LINC01560Q8TB33 94 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 NANPQ8TBE9 248 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 ST6GALNAC6Q969X2 333 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 FLYWCH2Q96CP2 140 aaKnown RBP15.04■□□□□ -0
PRPF40B-208ENST00000548436 NABP2Q9BQ15 211 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 TMEM204Q9BSN7 226 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 ELOVL1Q9BW60 279 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 MSRB2Q9Y3D2 182 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 IFITM10A6NMD0 228 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 E7EUB6 86 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 H7BYZ3 331 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 FOXH1O75593 365 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 CD3EP07766 207 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 TRGC1P0CF51 173 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 MLANAQ16655 118 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 TMEM155Q4W5P6 130 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 NDUFA4L2Q9NRX3 87 aa15.04■□□□□ -0
PRPF40B-208ENST00000548436 S100A9P06702 114 aaKnown RBP15.03■□□□□ -0
PRPF40B-208ENST00000548436 GCHFRP30047 84 aa15.03■□□□□ -0
PRPF40B-208ENST00000548436 GALR1P47211 349 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms