RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 MARCH11A6NNE9 402 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 A8MWP6 167 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 KRASP01116 189 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 RLN1P04808 185 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 OR13C7P0DN81 318 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 RPA2P15927 270 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 HLA-DMAP28067 261 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 HRH1P35367 487 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 ELLP55199 621 aaPredicted RBP7.07□□□□□ -1.28
YBX3-218ENST00000546298 SLC25A24Q6NUK1 477 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 MZT2AQ6P582 158 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 GDPD1Q8N9F7 314 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 UXS1Q8NBZ7 420 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 IL17DQ8TAD2 202 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 ZNF502Q8TBZ5 544 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 GPX8Q8TED1 209 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 LSM10Q969L4 123 aaKnown RBP7.07□□□□□ -1.28
YBX3-218ENST00000546298 TMEM56Q96MV1 263 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 ATP6V0BQ99437 205 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 FUNDC2Q9BWH2 189 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 HINT2Q9BX68 163 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 PLEKHA3Q9HB20 300 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 FAM212BQ9NTI7 297 aaPredicted RBP7.07□□□□□ -1.28
YBX3-218ENST00000546298 MRPL27Q9P0M9 148 aaKnown RBP7.07□□□□□ -1.28
YBX3-218ENST00000546298 PRNDQ9UKY0 176 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 TMEM213A2RRL7 107 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 MFSD2BA6NFX1 497 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 OR11H12B2RN74 326 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 EIF4EP06730 217 aaKnown RBP7.06□□□□□ -1.28
YBX3-218ENST00000546298 SERPINE2P07093 398 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 GPR183P32249 361 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 RCVRNP35243 200 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 RORCP51449 518 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 UCP3P55916 312 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 NCS1P62166 190 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 LINC00322Q6ZN03 302 aaPredicted RBP7.06□□□□□ -1.28
YBX3-218ENST00000546298 LYSMD2Q8IV50 215 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 C15orf40Q8WUR7 153 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 FCAMRQ8WWV6 532 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 AP3S1Q92572 193 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 SRD5A3Q9H8P0 318 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 EDA2RQ9HAV5 297 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 GAR1Q9NY12 217 aaKnown RBP7.06□□□□□ -1.28
YBX3-218ENST00000546298 OR51B2Q9Y5P1 312 aa7.06□□□□□ -1.28
YBX3-218ENST00000546298 FAM25AB3EWG3 89 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 FAM25CB3EWG5 89 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 FAM25GB3EWG6 89 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 TGOLN2O43493 480 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 CD7P09564 240 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 C8orf88P0DMB2 117 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 G6PCP35575 357 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 VBP1P61758 197 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 WT1-ASQ06250 92 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 ZNF585BQ52M93 769 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 PHLDA2Q53GA4 152 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 SPSB3Q6PJ21 355 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 RBPMS2Q6ZRY4 209 aaKnown RBP7.05□□□□□ -1.28
YBX3-218ENST00000546298 SNX29P2Q8IUI4 249 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 SLC38A6Q8IZM9 456 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 TMEM61Q8N0U2 210 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 DEFB125Q8N687 156 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 OR10W1Q8NGF6 305 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 OR52B4Q8NGK2 314 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
YBX3-218ENST00000546298 BSCL2Q96G97 398 aaPredicted RBP7.05□□□□□ -1.28
YBX3-218ENST00000546298 FXYD6Q9H0Q3 95 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 NDUFA4L2Q9NRX3 87 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 C21orf62Q9NYP8 219 aa7.05□□□□□ -1.28
YBX3-218ENST00000546298 F11RQ9Y624 299 aaKnown RBP7.05□□□□□ -1.28
YBX3-218ENST00000546298 ATG12O94817 140 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 ELK1P19419 428 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 TM4SF20Q53R12 229 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 H2BFWTQ7Z2G1 175 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 TBC1D26Q86UD7 250 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 OR4A16Q8NH70 328 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 CACNG8Q8WXS5 425 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 ZNF436Q9C0F3 470 aaPredicted RBP7.04□□□□□ -1.28
YBX3-218ENST00000546298 C5orf66Q9H5L9 145 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 MLXQ9UH92 298 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 NSG2Q9Y328 171 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 TENM3Q9P273 2699 aa7.04□□□□□ -1.28
YBX3-218ENST00000546298 IGHV3-35A0A0C4DH35 117 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 C15orf61A6NNL5 157 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 NDUFA4O00483 81 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 HPGDSO60760 199 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 SCAF4O95104 1147 aaKnown RBP7.03□□□□□ -1.28
YBX3-218ENST00000546298 PGAM2P15259 253 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 ZNF182P17025 639 aaPredicted RBP7.03□□□□□ -1.28
YBX3-218ENST00000546298 TBPP20226 339 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 EDN2P20800 178 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 Q56UQ5 140 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 RNASE10Q5GAN6 216 aaKnown RBP7.03□□□□□ -1.28
YBX3-218ENST00000546298 LAMTOR1Q6IAA8 161 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 BTNL8Q6UX41 500 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 UNQ9165/PRO28630Q6UXU0 137 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 OR1P1Q8NH06 330 aa7.03□□□□□ -1.28
YBX3-218ENST00000546298 SCARB1Q8WTV0 552 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms