RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 GLDNQ6ZMI3 551 aaPredicted RBP6.7□□□□□ -1.34
USP28-205ENST00000537706 SUMF2Q8NBJ7 301 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 MARC2Q969Z3 335 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 PHB2Q99623 299 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 SULT4A1Q9BR01 284 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 TRAPPC2LQ9UL33 140 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 PKD1P98161 4303 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 DEFB131BA0A096LNP1 70 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 IGKV1-9A0A0C4DH69 117 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 ZNF320A2RRD8 509 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 TMEM235A6NFC5 223 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 SNRPGP15A8MWD9 76 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 SSNA1O43805 119 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 CD74P04233 296 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 CMC4P56277 68 aaPredicted RBP6.7□□□□□ -1.34
USP28-205ENST00000537706 DEFA5Q01523 94 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 ELP2Q6IA86 826 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 LAMTOR1Q6IAA8 161 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 STEAP1BQ6NZ63 245 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 BTNL8Q6UX41 500 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 Q6ZTC4 211 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 PRR18Q8N4B5 295 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 KCNG3Q8TAE7 436 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 HYLS1Q96M11 299 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 GPN1Q9HCN4 374 aaPredicted RBP6.7□□□□□ -1.34
USP28-205ENST00000537706 OR2S2Q9NQN1 319 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 GHRLQ9UBU3 117 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 MLXQ9UH92 298 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 FLVCR2Q9UPI3 526 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 WASHC3Q9Y3C0 194 aa6.7□□□□□ -1.34
USP28-205ENST00000537706 MEIS3P1A6NDR6 274 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 CREBL2O60519 120 aaPredicted RBP6.69□□□□□ -1.34
USP28-205ENST00000537706 CD3DP04234 171 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 GSTT2P0CG29 244 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 TBPP20226 339 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 TMEM187Q14656 261 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 MEF2DQ14814 521 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 PSG5Q15238 335 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 RNF212Q495C1 297 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 GLIPR1L1Q6UWM5 242 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 ZNF833PQ6ZTB9 187 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 GPHB5Q86YW7 130 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 OR4D10Q8NGI6 311 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 OR10R2Q8NGX6 335 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 OR5B3Q8NH48 314 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 CD300LFQ8TDQ1 290 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 CACNG8Q8WXS5 425 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 FAM210AQ96ND0 272 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 GINS4Q9BRT9 223 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 TMEM59Q9BXS4 323 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 SELENOKQ9Y6D0 94 aa6.69□□□□□ -1.34
USP28-205ENST00000537706 OR4C46A6NHA9 309 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 MPPED1O15442 326 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 RAB3DO95716 219 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 CXCL3P19876 107 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 NPY1RP25929 384 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 KISS1Q15726 138 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 NDUFA5Q16718 116 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 BEST4Q8NFU0 473 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 OR51S1Q8NGJ8 323 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 ZNF503Q96F45 646 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 GPER1Q99527 375 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 LPAR5Q9H1C0 372 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 SMLR1H3BR10 107 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 FABP7O15540 132 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 OR2C1O95371 312 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 HBZP02008 142 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 ANXA7P20073 488 aaKnown RBP6.68□□□□□ -1.34
USP28-205ENST00000537706 RHOGP84095 191 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 RSU1Q15404 277 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 MORN2Q502X0 79 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 C6orf223Q8N319 242 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 OR56B1Q8NGI3 324 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 SLC25A21Q9BQT8 299 aaPredicted RBP6.68□□□□□ -1.34
USP28-205ENST00000537706 SEC22CQ9BRL7 303 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 URM1Q9BTM9 101 aaKnown RBP6.68□□□□□ -1.34
USP28-205ENST00000537706 ZNF436Q9C0F3 470 aaPredicted RBP6.68□□□□□ -1.34
USP28-205ENST00000537706 KCNIP1Q9NZI2 227 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 PIPOXQ9P0Z9 390 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 SCP2D1Q9UJQ7 156 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 JPT1Q9UK76 154 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 ANAPC10Q9UM13 185 aa6.68□□□□□ -1.34
USP28-205ENST00000537706 A0A0A6YYD4 124 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 UBE2QL1A1L167 161 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 OR7C1O76099 320 aaPredicted RBP6.67□□□□□ -1.34
USP28-205ENST00000537706 OR9G9P0C7N8 305 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 HIST1H1DP16402 221 aaKnown RBP6.67□□□□□ -1.34
USP28-205ENST00000537706 EDN2P20800 178 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 GNG2P59768 71 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 RPS27AP62979 156 aaKnown RBP6.67□□□□□ -1.34
USP28-205ENST00000537706 CDNFQ49AH0 187 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 RNASE10Q5GAN6 216 aaKnown RBP6.67□□□□□ -1.34
USP28-205ENST00000537706 ASCL4Q6XD76 172 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 IDO2Q6ZQW0 420 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 C9orf62Q8N4C0 152 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 PXT1Q8NFP0 134 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 OR2AK2Q8NG84 335 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 NUDCD2Q8WVJ2 157 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 PRRT1Q99946 306 aa6.67□□□□□ -1.34
USP28-205ENST00000537706 NICN1Q9BSH3 213 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms