RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 FAM231AP0DMU4 169 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 FAM231CP0DMU5 169 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 DTYMKP23919 212 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 RBMY1FQ15415 496 aaKnown RBP14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 SPHARQ15513 63 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 ZNF66Q6ZN08 573 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 MFSD4AQ8N468 514 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 RHPN1-AS1Q9BWJ2 59 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 HRASLSQ9HDD0 168 aa14.69□□□□□ -0.06
PDLIM1-202ENST00000477757 IGHV7-4-1A0A0J9YVY3 117 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 M0R2N4 97 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 CTXN2P0C2S0 81 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 LGALS9BQ3B8N2 356 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 LIPKQ5VXJ0 399 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 BPIFB6Q8NFQ5 453 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 AIFM2Q9BRQ8 373 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 COMMD5Q9GZQ3 224 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 C21orf62Q9NYP8 219 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 V9GY05 133 aa14.68□□□□□ -0.06
PDLIM1-202ENST00000477757 FGF2P09038 288 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 GNAO1P09471 354 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 HES5Q5TA89 166 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 C8orf59Q8N0T1 100 aaPredicted RBP14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 DHRSXQ8N5I4 330 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 UFD1Q92890 307 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 ZNF414Q96IQ9 312 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 GPHA2Q96T91 129 aa14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 QTRT1Q9BXR0 403 aaKnown RBP14.67□□□□□ -0.06
PDLIM1-202ENST00000477757 IGKV3-7A0A075B6H7 116 aa14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 MIFP14174 115 aa14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 FAM90A2PQ658T7 463 aa14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 THOC7Q6I9Y2 204 aaKnown RBP14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 TMEM116Q8NCL8 245 aa14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 OR10W1Q8NGF6 305 aa14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 ELF5Q9UKW6 265 aaPredicted RBP14.66□□□□□ -0.06
PDLIM1-202ENST00000477757 TRAV3A0A0B4J244 114 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 RBFOX2O43251 390 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 SERPINE2P07093 398 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 RAB6AP20340 208 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 CALRP27797 417 aaKnown RBP14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 RPS25P62851 125 aaKnown RBP14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 WT1-ASQ06250 92 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 POU2AF1Q16633 256 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 HSD17B13Q7Z5P4 300 aaPredicted RBP14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 CENPSQ8N2Z9 138 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 GBGT1Q8N5D6 347 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 SCARB1Q8WTV0 552 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 OR10C1Q96KK4 312 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 CMTM3Q96MX0 182 aa14.65□□□□□ -0.06
PDLIM1-202ENST00000477757 UPK2O00526 184 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 OR13C7P0DN81 318 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 TAS2R31P59538 309 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 TRAM1Q15629 374 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 SLC25A24Q6NUK1 477 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 SPAG16Q8N0X2 631 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 UBAC2Q8NBM4 344 aa14.64□□□□□ -0.07
PDLIM1-202ENST00000477757 ELOA3CA0A087WX78 387 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 IGHV3-49A0A0A0MS15 119 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 IGHV3-21A0A0B4J1V1 117 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 ZNF705EA8MWA4 302 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 K7EIM0 57 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 DFFBO76075 338 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 CTSGP08311 255 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 GIG44P09565 113 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 PSMA1P25786 263 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 ARL6IP1Q15041 203 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 MSMO1Q15800 293 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 CNIH2Q6PI25 160 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 PACRGLQ8N7B6 248 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 F11RQ9Y624 299 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 LRP1BQ9NZR2 4599 aa14.63□□□□□ -0.07
PDLIM1-202ENST00000477757 DEFB131BA0A096LNP1 70 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 NQO2P16083 231 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 PAFAH1B2P68402 229 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 RELQ04864 619 aaPredicted RBP14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 Q56UQ5 140 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 TMEM41BQ5BJD5 291 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 LEMD1Q68G75 181 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 Q6ZR54 194 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 NDUFAF3Q9BU61 184 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 DCSTAMPQ9H295 470 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 C8orf4Q9NR00 106 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 TMEM140Q9NV12 185 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 X6R8D5 127 aa14.62□□□□□ -0.07
PDLIM1-202ENST00000477757 METTL21EPA6NDL7 271 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 TNFSF12O43508 249 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 CDK2AP2O75956 126 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 TRAPPC2P0DI81 140 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 TRAPPC2BP0DI82 140 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 DEFB131AP59861 70 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 DGCR14Q96DF8 476 aaKnown RBP14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 CELA1Q9UNI1 258 aa14.61□□□□□ -0.07
PDLIM1-202ENST00000477757 NUPL2O15504 423 aaKnown RBP14.6□□□□□ -0.07
PDLIM1-202ENST00000477757 CD5P06127 495 aa14.6□□□□□ -0.07
PDLIM1-202ENST00000477757 FABP5Q01469 135 aa14.6□□□□□ -0.07
PDLIM1-202ENST00000477757 ZNF773Q6PK81 442 aa14.6□□□□□ -0.07
PDLIM1-202ENST00000477757 TCF24Q7RTU0 167 aa14.6□□□□□ -0.07
PDLIM1-202ENST00000477757 STHQ8IWL8 128 aa14.6□□□□□ -0.07
PDLIM1-202ENST00000477757 IGHV3OR16-13A0A075B7E8 117 aa14.59□□□□□ -0.07
PDLIM1-202ENST00000477757 TRAV14DV4A0A0A6YYC5 116 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms