RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 MAP1LC3B2A6NCE7 125 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 IL6RP08887 468 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 ORM2P19652 201 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 HERPUD1Q15011 391 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 C2orf68Q2NKX9 166 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 BTNL8Q6UX41 500 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 GCSAMQ8N6F7 178 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 RSG1Q9BU20 258 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 TMEM147Q9BVK8 224 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 MAP1LC3BQ9GZQ8 125 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 Q9UFV3 132 aa6.83□□□□□ -1.32
TMEM39A-202ENST00000438581 SONP18583 2426 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 PGA5P0DJD9 388 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 USF1P22415 310 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 S100A7P31151 101 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 UQCRFS1P47985 274 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 UBE2G1P62253 170 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 GAGE5Q13069 117 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 GAGE6Q13070 117 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF474Q6S9Z5 364 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 TMEM252Q8N6L7 170 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 CST9LQ9H4G1 147 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 MMP26Q9NRE1 261 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 IDI2-AS1Q9NZ38 188 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 DOCK11Q5JSL3 2073 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 K7ENP7 123 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 HPRT1P00492 218 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 ARG1P05089 322 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 NPY1RP25929 384 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 SULT1A1P50225 295 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 PJVKQ0ZLH3 352 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 RPL39P5Q59GN2 51 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 SLC35E4Q6ICL7 350 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 WDR82Q6UXN9 313 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF645Q8N7E2 425 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 OR10G4Q8NGN3 311 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 OR10G9Q8NGN4 311 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 OR10G7Q8NGN6 311 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 HIST1H2BAQ96A08 127 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 PATZ1Q9HBE1 687 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 COL4A4P53420 1690 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 IGSF23A1L1A6 192 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 H7BYZ3 331 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF207O43670 478 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 SNRPCP09234 159 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 MPZP25189 248 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 CCDC144NLQ6NUI1 221 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 TOMM20LQ6UXN7 152 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 C5orf24Q7Z6I8 188 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 ABHD12Q8N2K0 398 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 PRNDQ9UKY0 176 aa6.82□□□□□ -1.32
TMEM39A-202ENST00000438581 EREGO14944 169 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 NPBWR1P48145 328 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 OR1L8Q8NGR8 309 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 TMEM126AQ9H061 195 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 LPAR3Q9UBY5 353 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 IGHV3OR16-10A0A075B7F0 116 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 MBD3L4A6NDZ8 208 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 MBD3L3A6NE82 208 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 MBD3L5A6NJ08 208 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 CORTO00230 105 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 MMP23AO75900 390 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 C1QL1O75973 258 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 NUDT3O95989 172 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 CFDP00746 253 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 ATP6V0CP27449 155 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 BTCP35070 178 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 HIST1H3AP68431 136 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 MORN2Q502X0 79 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 KCNIP4Q6PIL6 250 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 LRRC75A-AS1Q8N1F1 130 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 OR4D5Q8NGN0 318 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 MBD3L2Q8NHZ7 208 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 ATP5SQ99766 215 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 SLC25A15Q9Y619 301 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 WSB1Q9Y6I7 421 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 TRAV24A0A0B4J272 114 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 IGHV2-70DA0A0C4DH43 119 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 K7EM74 188 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 IFNL4K9M1U5 179 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 CCL3L1P16619 93 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF66Q6ZN08 573 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 ZNF581Q9P0T4 197 aa6.81□□□□□ -1.32
TMEM39A-202ENST00000438581 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 C1QTNF9BB2RNN3 333 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 GAPDHP04406 335 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 C1QTNF9P0C862 333 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 TIGITQ495A1 244 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 HCP5Q6MZN7 132 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 PNKDQ8N490 385 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 SH2D2AQ9NP31 389 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 FBLN5Q9UBX5 448 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 ARFGEF3Q5TH69 2177 aa6.8□□□□□ -1.32
TMEM39A-202ENST00000438581 CHD7Q9P2D1 2997 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms