RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 VN1R17PQ8TDU5 208 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TCTEX1D2Q8WW35 142 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 PLCXD1Q9NUJ7 323 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TAS2R8Q9NYW2 309 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 PRELID3BQ9Y3B1 194 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 OR2W1Q9Y3N9 320 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 X6R8D5 127 aa8.58□□□□□ -1.04
SPTLC1P3-201ENST00000403408 IGHV3OR16-13A0A075B7E8 117 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 IGHV3-74A0A0B4J1X5 117 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 K7EIM0 57 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 ATP5HO75947 161 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 DHFRP00374 187 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 C12orf74Q32Q52 190 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 LGALS9BQ3B8N2 356 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 LIPKQ5VXJ0 399 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 LEMD1Q68G75 181 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 PVRIGQ6DKI7 326 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 BPIFB6Q8NFQ5 453 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SCARB1Q8WTV0 552 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 RHPN1-AS1Q9BWJ2 59 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 RAB22AQ9UL26 194 aa8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 MRPS7Q9Y2R9 242 aaKnown RBP8.57□□□□□ -1.04
SPTLC1P3-201ENST00000403408 IGHV7-4-1A0A0J9YVY3 117 aa8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 C15orf61A6NNL5 157 aa8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 UPK2O00526 184 aa8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 APOHP02749 345 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 AMBPP02760 352 aa8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CTSGP08311 255 aa8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 C4BPBP20851 252 aa8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 BSCL2Q96G97 398 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 C6orf62Q9GZU0 229 aaPredicted RBP8.56□□□□□ -1.04
SPTLC1P3-201ENST00000403408 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 C15orf62A8K5M9 175 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 ZNF705EA8MWA4 302 aaPredicted RBP8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TNFSF12O43508 249 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 PTHLHP12272 177 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 OR10A3P58181 314 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 DEFB131AP59861 70 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SPHARQ15513 63 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 GDPD1Q8N9F7 314 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 HSD17B10Q99714 261 aaKnown RBP8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 C21orf62Q9NYP8 219 aa8.55□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SSX5O60225 188 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 HRASP01112 189 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SERPINE2P07093 398 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CD36P16671 472 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CALRP27797 417 aaKnown RBP8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 MRPS15P82914 257 aaKnown RBP8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 FABP5Q01469 135 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SLC25A24Q6NUK1 477 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SPSB3Q6PJ21 355 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 MAPKAPK5-AS1Q8N8E1 139 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TMEM116Q8NCL8 245 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CSNK1G2-AS1Q8NCQ2 148 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 OR10C1Q96KK4 312 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 HRASLSQ9HDD0 168 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 V9GY05 133 aa8.54□□□□□ -1.04
SPTLC1P3-201ENST00000403408 DEFB131BA0A096LNP1 70 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 TEX50A0A1B0GTY4 177 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 NUPL2O15504 423 aaKnown RBP8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CD74P04233 296 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 DTYMKP23919 212 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 ZNF66Q6ZN08 573 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 NR2C2APQ86WQ0 139 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SPAG16Q8N0X2 631 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 DHRSXQ8N5I4 330 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 NUDCD2Q8WVJ2 157 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 GIMAP1Q8WWP7 306 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 ST8SIA2Q92186 375 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 SRSF8Q9BRL6 282 aaKnown RBP8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 MND1Q9BWT6 205 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 QTRT1Q9BXR0 403 aaKnown RBP8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 MS4A6AQ9H2W1 248 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 CLEC5AQ9NY25 188 aa8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
SPTLC1P3-201ENST00000403408 J3QL48 77 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 IGHV3-48P01763 117 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 MIFP14174 115 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TALDO1P37837 337 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 CDNFQ49AH0 187 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 Q6ZRM9 215 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 UBAC2Q8NBM4 344 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 NDUFA4L2Q9NRX3 87 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 TMEM140Q9NV12 185 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 THYN1Q9P016 225 aa8.52□□□□□ -1.05
SPTLC1P3-201ENST00000403408 IGHV3-66A0A0C4DH42 116 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 DBX1A6NMT0 343 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 PTGES3LE9PB15 166 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 SULT1C2O00338 296 aa8.51□□□□□ -1.05
SPTLC1P3-201ENST00000403408 CDK2AP2O75956 126 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms