RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SMIM31A0A1B0GVY4 71 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 IGLC7A0M8Q6 106 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 TMEM213A2RRL7 107 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 RBMY1BA6NDE4 496 aaKnown RBP15.83■□□□□ 0.12
VSX1-201ENST00000376707 RBMY1EA6NEQ0 496 aaKnown RBP15.83■□□□□ 0.12
VSX1-201ENST00000376707 A8MWP6 167 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 RLN1P04808 185 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 CLEC3BP05452 202 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 RBMY1DP0C7P1 496 aaKnown RBP15.83■□□□□ 0.12
VSX1-201ENST00000376707 F2RP25116 425 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 HRH1P35367 487 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 UXS1Q8NBZ7 420 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 FXYD6Q9H0Q3 95 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 THYN1Q9P016 225 aa15.83■□□□□ 0.12
VSX1-201ENST00000376707 CMTM1Q8IZ96 169 aa15.82■□□□□ 0.12
VSX1-201ENST00000376707 TMEM61Q8N0U2 210 aa15.82■□□□□ 0.12
VSX1-201ENST00000376707 MLXQ9UH92 298 aa15.82■□□□□ 0.12
VSX1-201ENST00000376707 MARCH11A6NNE9 402 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 GPR31O00270 319 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 CYB5BO43169 146 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 SMIM18P0DKX4 95 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 RPA2P15927 270 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 ELK1P19419 428 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 HLA-DMAP28067 261 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 GPR183P32249 361 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 RORCP51449 518 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 ERVK-16P61578 105 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 CTF1Q16619 201 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 THOC7Q6I9Y2 204 aaKnown RBP15.81■□□□□ 0.12
VSX1-201ENST00000376707 IL17DQ8TAD2 202 aa15.81■□□□□ 0.12
VSX1-201ENST00000376707 DGCR14Q96DF8 476 aaKnown RBP15.81■□□□□ 0.12
VSX1-201ENST00000376707 QTRT1Q9BXR0 403 aaKnown RBP15.81■□□□□ 0.12
VSX1-201ENST00000376707 HPGDSO60760 199 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 GABARAPO95166 117 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 TM4SF20Q53R12 229 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 PLET1Q6UQ28 207 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 BTNL8Q6UX41 500 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 OR52B4Q8NGK2 314 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 ZNF502Q8TBZ5 544 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 FCAMRQ8WWV6 532 aa15.8■□□□□ 0.12
VSX1-201ENST00000376707 STARD9Q9P2P6 4700 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 SCAF4O95104 1147 aaKnown RBP15.79■□□□□ 0.12
VSX1-201ENST00000376707 TRAPPC2P0DI81 140 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 TRAPPC2BP0DI82 140 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 PTBP1P26599 531 aaKnown RBP eCLIP15.79■□□□□ 0.12
VSX1-201ENST00000376707 RCVRNP35243 200 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 LPAR6P43657 344 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 ANKRD55Q3KP44 614 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 ZNF585BQ52M93 769 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 UNQ9165/PRO28630Q6UXU0 137 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 HSD17B13Q7Z5P4 300 aaPredicted RBP15.79■□□□□ 0.12
VSX1-201ENST00000376707 SNX29P2Q8IUI4 249 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 OR10W1Q8NGF6 305 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 MARC2Q969Z3 335 aa15.79■□□□□ 0.12
VSX1-201ENST00000376707 FAM212BQ9NTI7 297 aaPredicted RBP15.79■□□□□ 0.12
VSX1-201ENST00000376707 IGHV3-35A0A0C4DH35 117 aa15.78■□□□□ 0.12
VSX1-201ENST00000376707 OR13C7P0DN81 318 aa15.78■□□□□ 0.12
VSX1-201ENST00000376707 LPCAT3Q6P1A2 487 aa15.78■□□□□ 0.12
VSX1-201ENST00000376707 GDPD1Q8N9F7 314 aa15.78■□□□□ 0.12
VSX1-201ENST00000376707 NAA50Q9GZZ1 169 aaKnown RBP15.78■□□□□ 0.12
VSX1-201ENST00000376707 UFC1Q9Y3C8 167 aa15.78■□□□□ 0.12
VSX1-201ENST00000376707 CSMD3Q7Z407 3707 aa15.78■□□□□ 0.12
VSX1-201ENST00000376707 TEX50A0A1B0GTY4 177 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 KRASP01116 189 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 UCP3P55916 312 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 TSPAN5P62079 268 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 SLC25A24Q6NUK1 477 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 MZT2AQ6P582 158 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 RBPMS2Q6ZRY4 209 aaKnown RBP15.77■□□□□ 0.12
VSX1-201ENST00000376707 OR1L8Q8NGR8 309 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 VN1R17PQ8TDU5 208 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 AP3S1Q92572 193 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 HINT2Q9BX68 163 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 NDUFA4L2Q9NRX3 87 aa15.77■□□□□ 0.12
VSX1-201ENST00000376707 MRPL27Q9P0M9 148 aaKnown RBP15.77■□□□□ 0.12
VSX1-201ENST00000376707 TRAV25A0A0B4J276 109 aa15.76■□□□□ 0.11
VSX1-201ENST00000376707 TGOLN2O43493 480 aa15.76■□□□□ 0.11
VSX1-201ENST00000376707 SERPINE2P07093 398 aa15.76■□□□□ 0.11
VSX1-201ENST00000376707 ZNF182P17025 639 aaPredicted RBP15.76■□□□□ 0.11
VSX1-201ENST00000376707 ELLP55199 621 aaPredicted RBP15.76■□□□□ 0.11
VSX1-201ENST00000376707 WT1-ASQ06250 92 aa15.76■□□□□ 0.11
VSX1-201ENST00000376707 SACSQ9NZJ4 4579 aa15.76■□□□□ 0.11
VSX1-201ENST00000376707 SNAPC5O75971 98 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 C8orf88P0DMB2 117 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 S100GP29377 79 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 G6PCP35575 357 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 PHLDA2Q53GA4 152 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 SLC38A6Q8IZM9 456 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 OR1L6Q8NGR2 347 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 LSM10Q969L4 123 aaKnown RBP15.75■□□□□ 0.11
VSX1-201ENST00000376707 GGTLC1Q9BX51 225 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 ZNF436Q9C0F3 470 aaPredicted RBP15.75■□□□□ 0.11
VSX1-201ENST00000376707 OR51B2Q9Y5P1 312 aa15.75■□□□□ 0.11
VSX1-201ENST00000376707 OR2T8A6NH00 312 aa15.74■□□□□ 0.11
VSX1-201ENST00000376707 JTBO76095 146 aa15.74■□□□□ 0.11
VSX1-201ENST00000376707 PRNDQ9UKY0 176 aa15.74■□□□□ 0.11
VSX1-201ENST00000376707 NSG2Q9Y328 171 aa15.74■□□□□ 0.11
VSX1-201ENST00000376707 LOC102724200A0A096LPH7 203 aaPredicted RBP15.73■□□□□ 0.11
VSX1-201ENST00000376707 FAM25AB3EWG3 89 aa15.73■□□□□ 0.11
VSX1-201ENST00000376707 FAM25CB3EWG5 89 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms