RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZNF57Q68EA5 555 aaPredicted RBP10.7□□□□□ -0.7
NELFE-201ENST00000375425 LYSMD2Q8IV50 215 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 OR6F1Q8NGZ6 308 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 FCAMRQ8WWV6 532 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 SRD5A3Q9H8P0 318 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 RETNQ9HD89 108 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 VCX3AQ9NNX9 186 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 MLXQ9UH92 298 aa10.7□□□□□ -0.7
NELFE-201ENST00000375425 IGHV3-35A0A0C4DH35 117 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 A8MWP6 167 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 TNFAIP8O95379 198 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 KRASP01116 189 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 SERPINE2P07093 398 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 TRAPPC2P0DI81 140 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 TRAPPC2BP0DI82 140 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 OR13C7P0DN81 318 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 HLA-DMAP28067 261 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 GPR183P32249 361 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 HRH1P35367 487 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 LPAR6P43657 344 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 ERVK-16P61578 105 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 WT1-ASQ06250 92 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 SLC25A24Q6NUK1 477 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 PLET1Q6UQ28 207 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 UNQ9165/PRO28630Q6UXU0 137 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 CMTM1Q8IZ96 169 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 TMEM61Q8N0U2 210 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 OR1L8Q8NGR8 309 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 ZNF502Q8TBZ5 544 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 SLC25A46Q96AG3 418 aa10.69□□□□□ -0.7
NELFE-201ENST00000375425 DGCR14Q96DF8 476 aaKnown RBP10.69□□□□□ -0.7
NELFE-201ENST00000375425 GPR31O00270 319 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 EIF4EP06730 217 aaKnown RBP10.68□□□□□ -0.7
NELFE-201ENST00000375425 ZNF585BQ52M93 769 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 SLC16A13Q7RTY0 426 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 GDPD1Q8N9F7 314 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 HINT2Q9BX68 163 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 NDUFA4L2Q9NRX3 87 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 COMMD3Q9UBI1 195 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
NELFE-201ENST00000375425 SMIM31A0A1B0GVY4 71 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 CYB5BO43169 146 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 SCAF4O95104 1147 aaKnown RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 C8orf88P0DMB2 117 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 G6PCP35575 357 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 NCS1P62166 190 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 THOC7Q6I9Y2 204 aaKnown RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 BTNL8Q6UX41 500 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 HSD17B13Q7Z5P4 300 aaPredicted RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 CADM3Q8N126 398 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 VN1R17PQ8TDU5 208 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 GPX8Q8TED1 209 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 FAM110AQ9BQ89 295 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 FXYD6Q9H0Q3 95 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 OR51B2Q9Y5P1 312 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 HYDINQ4G0P3 5121 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 LCE6AA0A183 80 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 OR2T8A6NH00 312 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 SNAPC5O75971 98 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 VBP1P61758 197 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 TSPAN5P62079 268 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 PHLDA2Q53GA4 152 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 OR52B4Q8NGK2 314 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 MARC2Q969Z3 335 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 FUNDC2Q9BWH2 189 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 ZNF436Q9C0F3 470 aaPredicted RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 MRPL27Q9P0M9 148 aaKnown RBP10.67□□□□□ -0.7
NELFE-201ENST00000375425 UFC1Q9Y3C8 167 aa10.67□□□□□ -0.7
NELFE-201ENST00000375425 IGHV3-21A0A0B4J1V1 117 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 TGOLN2O43493 480 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 APOA1P02647 267 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 MFAP2P55001 183 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 ELLP55199 621 aaPredicted RBP10.66□□□□□ -0.7
NELFE-201ENST00000375425 ANKRD55Q3KP44 614 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 LPCAT3Q6P1A2 487 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
NELFE-201ENST00000375425 SNX29P2Q8IUI4 249 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 CMTM3Q96MX0 182 aa10.66□□□□□ -0.7
NELFE-201ENST00000375425 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
NELFE-201ENST00000375425 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
NELFE-201ENST00000375425 DBX1A6NMT0 343 aa10.65□□□□□ -0.7
NELFE-201ENST00000375425 SCARB1Q8WTV0 552 aa10.65□□□□□ -0.7
NELFE-201ENST00000375425 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
NELFE-201ENST00000375425 SCPEP1Q9HB40 452 aa10.65□□□□□ -0.7
NELFE-201ENST00000375425 FKBP11Q9NYL4 201 aa10.65□□□□□ -0.7
NELFE-201ENST00000375425 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
NELFE-201ENST00000375425 ELK1P19419 428 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 S100GP29377 79 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 SPSB3Q6PJ21 355 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 TBC1D26Q86UD7 250 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 OR1L6Q8NGR2 347 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 OR5B3Q8NH48 314 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 TMEM190Q8WZ59 177 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 TMEM56Q96MV1 263 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 TSC22D3Q99576 134 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 CHRDL1Q9BU40 450 aa10.64□□□□□ -0.71
NELFE-201ENST00000375425 C5orf66Q9H5L9 145 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms