RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SLC38A6Q8IZM9 456 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 ISOC1Q96CN7 298 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 NEURL2Q9BR09 285 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 UFC1Q9Y3C8 167 aa14.3□□□□□ -0.12
TMEM53-201ENST00000372235 CGB1A6NKQ9 187 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 KRASP01116 189 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 LYL1P12980 280 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 MYOD1P15172 320 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 NCS1P62166 190 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 ZNF57Q68EA5 555 aaPredicted RBP14.29□□□□□ -0.12
TMEM53-201ENST00000372235 PLET1Q6UQ28 207 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 FCAMRQ8WWV6 532 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 NDUFA4L2Q9NRX3 87 aa14.29□□□□□ -0.12
TMEM53-201ENST00000372235 GAR1Q9NY12 217 aaKnown RBP14.29□□□□□ -0.12
TMEM53-201ENST00000372235 TRAV3A0A0B4J244 114 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 TEX50A0A1B0GTY4 177 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 IZUMO1RA6ND01 250 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 IGHV3-23P01764 117 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 HLA-AP01891 365 aaKnown RBP14.28□□□□□ -0.12
TMEM53-201ENST00000372235 OR13C7P0DN81 318 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 GUCA2BQ16661 112 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 HAGHQ16775 308 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 CASC10Q5T4H9 136 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 SPSB3Q6PJ21 355 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 MRPL27Q9P0M9 148 aaKnown RBP14.28□□□□□ -0.12
TMEM53-201ENST00000372235 OR51B2Q9Y5P1 312 aa14.28□□□□□ -0.12
TMEM53-201ENST00000372235 TRAV25A0A0B4J276 109 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 ZNF785A8K8V0 405 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 FAM25AB3EWG3 89 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 FAM25CB3EWG5 89 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 FAM25GB3EWG6 89 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 TBPP20226 339 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 SLC25A24Q6NUK1 477 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 ADAMTSL5Q6ZMM2 481 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 C19orf35Q6ZS72 473 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 SNX29P2Q8IUI4 249 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 BSCL2Q96G97 398 aaPredicted RBP14.27□□□□□ -0.13
TMEM53-201ENST00000372235 ZNF486Q96H40 463 aaPredicted RBP14.27□□□□□ -0.13
TMEM53-201ENST00000372235 FXYD6Q9H0Q3 95 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 F11RQ9Y624 299 aaKnown RBP14.27□□□□□ -0.13
TMEM53-201ENST00000372235 CEPT1Q9Y6K0 416 aa14.27□□□□□ -0.13
TMEM53-201ENST00000372235 MFSD2BA6NFX1 497 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 ATG12O94817 140 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 RPA2P15927 270 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 ZNF182P17025 639 aaPredicted RBP14.26□□□□□ -0.13
TMEM53-201ENST00000372235 ELK1P19419 428 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 GPR183P32249 361 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 G6PCP35575 357 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 IL17DQ8TAD2 202 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 HINT2Q9BX68 163 aa14.26□□□□□ -0.13
TMEM53-201ENST00000372235 TMEM213A2RRL7 107 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 OR11H12B2RN74 326 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 TGOLN2O43493 480 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 HPGDSO60760 199 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 GABARAPO95166 117 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 WT1-ASQ06250 92 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 ZNF585BQ52M93 769 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 PHLDA2Q53GA4 152 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 RBPMS2Q6ZRY4 209 aaKnown RBP14.25□□□□□ -0.13
TMEM53-201ENST00000372235 H2BFWTQ7Z2G1 175 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 TBC1D26Q86UD7 250 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 ARRDC1Q8N5I2 433 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 UXS1Q8NBZ7 420 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 OR10W1Q8NGF6 305 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 OR4A16Q8NH70 328 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 ZNF436Q9C0F3 470 aaPredicted RBP14.25□□□□□ -0.13
TMEM53-201ENST00000372235 PLEKHA3Q9HB20 300 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 S4R3C0 116 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 TENM3Q9P273 2699 aa14.25□□□□□ -0.13
TMEM53-201ENST00000372235 C15orf61A6NNL5 157 aa14.24□□□□□ -0.13
TMEM53-201ENST00000372235 C8orf88P0DMB2 117 aa14.24□□□□□ -0.13
TMEM53-201ENST00000372235 RNASE10Q5GAN6 216 aaKnown RBP14.24□□□□□ -0.13
TMEM53-201ENST00000372235 LINC00322Q6ZN03 302 aaPredicted RBP14.24□□□□□ -0.13
TMEM53-201ENST00000372235 OR1P1Q8NH06 330 aa14.24□□□□□ -0.13
TMEM53-201ENST00000372235 TMEM14BQ9NUH8 114 aa14.24□□□□□ -0.13
TMEM53-201ENST00000372235 C21orf62Q9NYP8 219 aa14.24□□□□□ -0.13
TMEM53-201ENST00000372235 LAMTOR1Q6IAA8 161 aa14.23□□□□□ -0.13
TMEM53-201ENST00000372235 OR52B4Q8NGK2 314 aa14.23□□□□□ -0.13
TMEM53-201ENST00000372235 SRD5A3Q9H8P0 318 aa14.23□□□□□ -0.13
TMEM53-201ENST00000372235 DAZ1Q9NQZ3 744 aaKnown RBP14.23□□□□□ -0.13
TMEM53-201ENST00000372235 NDUFA4O00483 81 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 B3GALNT1O75752 331 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 CD7P09564 240 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 RND3P61587 244 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 MRPS10P82664 201 aaKnown RBP14.22□□□□□ -0.13
TMEM53-201ENST00000372235 RELQ04864 619 aaPredicted RBP14.22□□□□□ -0.13
TMEM53-201ENST00000372235 CTF1Q16619 201 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 TMEM61Q8N0U2 210 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 WDR89Q96FK6 387 aaPredicted RBP14.22□□□□□ -0.13
TMEM53-201ENST00000372235 MRPS26Q9BYN8 205 aaKnown RBP14.22□□□□□ -0.13
TMEM53-201ENST00000372235 C5orf66Q9H5L9 145 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 EDA2RQ9HAV5 297 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 RABL2AQ9UBK7 228 aaPredicted RBP14.22□□□□□ -0.13
TMEM53-201ENST00000372235 RABL2BQ9UNT1 228 aa14.22□□□□□ -0.13
TMEM53-201ENST00000372235 KMT2CQ8NEZ4 4911 aaKnown RBP14.21□□□□□ -0.13
TMEM53-201ENST00000372235 ERHP84090 104 aaKnown RBP14.21□□□□□ -0.13
TMEM53-201ENST00000372235 SSBP1Q04837 148 aaKnown RBP14.21□□□□□ -0.13
TMEM53-201ENST00000372235 GPR107Q5VW38 600 aa14.21□□□□□ -0.13
TMEM53-201ENST00000372235 DEFB125Q8N687 156 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms