RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 C4orf51C9J302 202 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 C18orf15Q96N68 181 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 PPP1R3EQ9H7J1 279 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 TMEM14DPA8MWL7 114 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 FOXC2Q99958 501 aa13.25□□□□□ -0.29
NUCKS1-201ENST00000367142 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 TTC9CQ8N5M4 171 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 FER1L6-AS1Q8NA97 138 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 NEUROG1Q92886 237 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 CD7P09564 240 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 IGFBP2P18065 325 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 FAM71F2Q6NXP2 309 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 SLC25A38Q96DW6 304 aa13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 ELF5Q9UKW6 265 aaPredicted RBP13.24□□□□□ -0.29
NUCKS1-201ENST00000367142 TRGV11A0A075B6L2 103 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 IQCF6A8MYZ5 107 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 DANCRP0C864 163 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 WDYHV1Q96HA8 205 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 RPP21Q9H633 154 aaKnown RBP13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 SOD3P08294 240 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 EIF4EBP2Q13542 120 aaPredicted RBP13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 TBR1Q16650 682 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 APOHP02749 345 aaPredicted RBP13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 MRPS18CQ9Y3D5 142 aaKnown RBP13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 MSGN1A6NI15 193 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 C9orf106Q8NAJ2 232 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 PARD6GQ9BYG4 376 aaPredicted RBP13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 VENTXO95231 258 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 OR9G4Q8NGQ1 327 aa13.23□□□□□ -0.29
NUCKS1-201ENST00000367142 TRAV14DV4A0A0A6YYC5 116 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 A0A1B0GUT8 65 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 ZNF324BQ6AW86 544 aaPredicted RBP13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 CACNG8Q8WXS5 425 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 DMRTA2Q96SC8 542 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 NPDC1Q9NQX5 325 aaPredicted RBP13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 GREM1O60565 184 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 IGHV3OR16-8A0A075B7F1 116 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 CGAP01215 116 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 Q9H3A6 140 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 C3orf36Q3SXR2 165 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 C1QTNF5Q9BXJ0 243 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 OTORQ9NRC9 128 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 MYH14Q7Z406 1995 aaKnown RBP13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 NUP205Q92621 2012 aa13.22□□□□□ -0.29
NUCKS1-201ENST00000367142 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 WNT2P09544 360 aa13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 ZNF660Q6AZW8 331 aaPredicted RBP13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 APCDD1LQ8NCL9 501 aa13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 ASCL2Q99929 193 aa13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 MYO5AQ9Y4I1 1855 aaKnown RBP13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 C1QCP02747 245 aa13.21□□□□□ -0.29
NUCKS1-201ENST00000367142 C17orf98A8MV24 154 aa13.21□□□□□ -0.3
NUCKS1-201ENST00000367142 E9PLN8 166 aa13.21□□□□□ -0.3
NUCKS1-201ENST00000367142 CD300CQ08708 224 aa13.21□□□□□ -0.3
NUCKS1-201ENST00000367142 DEFB121Q5J5C9 76 aa13.21□□□□□ -0.3
NUCKS1-201ENST00000367142 VKORC1Q9BQB6 163 aa13.21□□□□□ -0.3
NUCKS1-201ENST00000367142 VCX2Q9H322 139 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 CD8AP01732 235 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 SAA1P0DJI8 122 aaPredicted RBP13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 SAP30O75446 220 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 LY6DQ14210 128 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 MTURNQ8N3F0 131 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 SLC25A28Q96A46 364 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 LILRA1O75019 489 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 EGR4Q05215 589 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 PSG7Q13046 419 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 MUC21Q5SSG8 566 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 ATOH7Q8N100 152 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TMEM133Q9H2Q1 129 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TMEM50AO95807 157 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TM2D1Q9BX74 207 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TBL2Q9Y4P3 447 aaKnown RBP13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 IGKV3D-20A0A0C4DH25 116 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 MUC21A0A0G2JKD1 596 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 MUC21A0A140T8X8 626 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 PIN1P1O15428 100 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TMEM105Q8N8V8 129 aa13.2□□□□□ -0.3
NUCKS1-201ENST00000367142 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 A0A0G2JMM0 328 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 A0A1W2PPB8 328 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 A0A1W2PRS3 328 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 KIR3DP1A8MWS1 328 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 CDK2AP2O75956 126 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 PSMG4Q5JS54 123 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 SPACA3Q8IXA5 215 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 TFF3Q07654 80 aa13.19□□□□□ -0.3
NUCKS1-201ENST00000367142 SDHCQ99643 169 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms