RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 EBI3Q14213 229 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST2H2BEQ16778 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 Q6Q795 121 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 OR10P1Q8NGE3 313 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 OR10K1Q8NGX5 313 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SLC25A40Q8TBP6 338 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BHQ93079 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGF2BP2-AS1Q96M15 143 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ZNF285Q96NJ3 590 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BNQ99877 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H2BMQ99879 126 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CHST6Q9GZX3 395 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 DUSP21Q9H596 190 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IL36BQ9NZH7 164 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 FUT9Q9Y231 359 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ATG2BQ96BY7 2078 aa2.2□□□□□ -2.06
RNU6-1249P-201ENST00000363237 FMN1Q68DA7 1419 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 A0A1B0GU33 70 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SIGLEC16A6NMB1 481 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 J3QRK9 145 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ORC5O43913 435 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CDS2O95674 445 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IFNA14P01570 189 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 C1QAP02745 245 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PRM2P04554 102 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 G6PCP35575 357 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HIST1H4AP62805 103 aaKnown RBP2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ZNF117Q03924 483 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TMEM78Q5T7P6 136 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 EIF4E3Q8N5X7 224 aaKnown RBP2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PACRGLQ8N7B6 248 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 Q8NAQ8 132 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CLDND2Q8NHS1 167 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MIEN1Q9BRT3 115 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RNF122Q9H9V4 155 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CYSLTR1Q9Y271 337 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LCTP09848 1927 aa2.19□□□□□ -2.06
RNU6-1249P-201ENST00000363237 NYNRINQ9P2P1 1898 aaKnown RBP2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGLV2-18A0A075B6J9 118 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGKV6D-41A0A0C4DH26 115 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LOC102725191A0A1B0GVB3 256 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TMEM269A0A1B0GVZ9 245 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 FUOMA2VDF0 154 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MAP1LC3B2A6NCE7 125 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 C19orf71A6NCJ1 209 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PSCAO43653 123 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGKV1-5P01602 117 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 APOA2P02652 100 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SMIM17P0DL12 118 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RPS4Y1P22090 263 aaKnown RBP2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 COL8A2P25067 703 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 S100GP29377 79 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ATP5G3P48201 142 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 S100A12P80511 92 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HTR4Q13639 388 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RHEBQ15382 184 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SCGB2B2Q4G0G5 96 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LYRM7Q5U5X0 104 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 NOXRED1Q6NXP6 359 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 DCUN1D2Q6PH85 259 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TOMM20LQ6UXN7 152 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HMGN2P46Q86SG4 172 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 C12orf29Q8N999 325 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ZNF675Q8TD23 568 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SMCR5Q8TEV8 140 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SKA2Q8WVK7 121 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 H1FXQ92522 213 aaKnown RBP2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MALSU1Q96EH3 234 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LYSMD1Q96S90 227 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 SERPINI1Q99574 410 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IMUPQ9GZP8 106 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MAP1LC3BQ9GZQ8 125 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 AICDAQ9GZX7 198 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PBOV1Q9GZY1 135 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 MED29Q9NX70 200 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HSPB11Q9Y547 144 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 HEY1Q9Y5J3 304 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PLXND1Q9Y4D7 1925 aa2.18□□□□□ -2.06
RNU6-1249P-201ENST00000363237 ECM29Q5VYK3 1845 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 VIRMAQ69YN4 1812 aaKnown RBP2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 IGKV1D-43A0A0B4J1Z2 117 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TRAV38-1A0A0B4J264 116 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TMEM235A6NFC5 223 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 C17orf98A8MV24 154 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 K7EM74 188 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TXNDC9O14530 226 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 TP53I11O14683 189 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 LEPROTO15243 131 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 OR2J2O76002 312 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CD24P25063 80 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CD200P41217 278 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 PIGPP57054 158 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 RPS11P62280 158 aaKnown RBP eCLIP2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 DNLZQ5SXM8 178 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 AADACL3Q5VUY0 350 aa2.17□□□□□ -2.06
RNU6-1249P-201ENST00000363237 AMMECR1LQ6DCA0 310 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms