RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 UNQ9370/PRO34162Q6UXP9 181 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 TBC1D26Q86UD7 250 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
LEMD3-201ENST00000308330 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 TRAV8-4A0A0B4J246 113 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 CENPVL1A0A0U1RR11 272 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 OR9G9P0C7N8 305 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 HERVK_113P61574 105 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 TPRX1Q8N7U7 411 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 OR9G4Q8NGQ1 327 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 ABHD14AQ9BUJ0 271 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 ZNF391Q9UJN7 358 aa13.03□□□□□ -0.32
LEMD3-201ENST00000308330 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.32
LEMD3-201ENST00000308330 FXYD3Q14802 87 aa13.02□□□□□ -0.32
LEMD3-201ENST00000308330 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.32
LEMD3-201ENST00000308330 KLHDC2Q9Y2U9 406 aa13.02□□□□□ -0.32
LEMD3-201ENST00000308330 TMEM8BA6NDV4 472 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 H7C2G1 150 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 NTN1O95631 604 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 IGKV1D-16P01601 117 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 EGR1P18146 543 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 ABHD14BQ96IU4 210 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 GNB4Q9HAV0 340 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 PXMP4Q9Y6I8 212 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 EP400Q96L91 3159 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 P01737 135 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 TMEM50BP56557 158 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 MEF2CQ06413 473 aaPredicted RBP13.02□□□□□ -0.33
LEMD3-201ENST00000308330 ANXA2RQ3ZCQ2 193 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 PCNX2A6NKB5 2137 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 ARID2Q68CP9 1835 aa13.02□□□□□ -0.33
LEMD3-201ENST00000308330 SPRY1O43609 319 aaPredicted RBP13.01□□□□□ -0.33
LEMD3-201ENST00000308330 NDUFB3O43676 98 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 COX6A1P12074 109 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 Q6ZWC4 215 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.01□□□□□ -0.33
LEMD3-201ENST00000308330 RAB1BQ9H0U4 201 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 LCTP09848 1927 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 TNFAIP6P98066 277 aaPredicted RBP13.01□□□□□ -0.33
LEMD3-201ENST00000308330 IGLC7A0M8Q6 106 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 C4orf51C9J302 202 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 F8W1H4 67 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
LEMD3-201ENST00000308330 SIVA1O15304 175 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 PRTN3P24158 256 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 TCTEX1D4Q5JR98 221 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 VSIG8P0DPA2 414 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 PCOLCEQ15113 449 aa13.01□□□□□ -0.33
LEMD3-201ENST00000308330 CCDC88CQ9P219 2028 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 SMIM10L1P0DMW3 83 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 GPR6P46095 362 aaPredicted RBP13□□□□□ -0.33
LEMD3-201ENST00000308330 ZNF441Q8N8Z8 693 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 SMIM10Q96HG1 83 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 OR3A4PP47883 348 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 TAF15Q92804 592 aaKnown RBP eCLIP13□□□□□ -0.33
LEMD3-201ENST00000308330 RAB1CQ92928 201 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 SPSB4Q96A44 273 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 S1PR3Q99500 378 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 KLF12Q9Y4X4 402 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13□□□□□ -0.331e-8■■■■■ 40.5
LEMD3-201ENST00000308330 TEX48A0A1B0GUV7 120 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 PSG5Q15238 335 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 FBXL7Q9UJT9 491 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 THADAQ6YHU6 1953 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 CACNA1DQ01668 2161 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 ZNF414Q96IQ9 312 aa13□□□□□ -0.33
LEMD3-201ENST00000308330 RPL36A-HNRNPH2H7BZ11 118 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 LHX2P50458 406 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 OSR2Q8N2R0 312 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 GGTLC1Q9BX51 225 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 hDV102S1A0JD36 115 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 CRYM-AS1A6NIL9 109 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 WBP1Q96G27 269 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 PLPPR2Q96GM1 343 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 SLC25A33Q9BSK2 321 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 CRIM1Q9NZV1 1036 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 TRAV38-1A0A0B4J264 116 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 FAM181BA6NEQ2 426 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 TMEM50AO95807 157 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 IL18BPO95998 194 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 DEFA4P12838 97 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 ICAM5Q9UMF0 924 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 CD59P13987 128 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 FAM214BQ7L5A3 538 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 RFLNBQ8N5W9 214 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 MRGPRFQ96AM1 343 aa12.99□□□□□ -0.33
LEMD3-201ENST00000308330 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
LEMD3-201ENST00000308330 CXorf66Q5JRM2 361 aaPredicted RBP12.98□□□□□ -0.33
LEMD3-201ENST00000308330 SAXO1Q8IYX7 474 aa12.98□□□□□ -0.33
LEMD3-201ENST00000308330 EDA2RQ9HAV5 297 aa12.98□□□□□ -0.33
LEMD3-201ENST00000308330 RLFQ13129 1914 aa12.98□□□□□ -0.33
LEMD3-201ENST00000308330 TCF20Q9UGU0 1960 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms