RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 BTNL8Q6UX41 500 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 STPG3Q8N7X2 389 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 SPAG8Q99932 426 aaPredicted RBP13.38□□□□□ -0.27
MKS1-209ENST00000580127 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
MKS1-209ENST00000580127 VCX3BQ9H321 246 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 C5orf66Q9H5L9 145 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 NDUFB11Q9NX14 153 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 BET1LQ9NYM9 111 aa13.38□□□□□ -0.27
MKS1-209ENST00000580127 IGKV1D-13A0A0B4J2D9 117 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 NOTOA8MTQ0 251 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 E7EUB6 86 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 IGKV1-13P0DP09 117 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
MKS1-209ENST00000580127 EDN2P20800 178 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.27
MKS1-209ENST00000580127 AQP4P55087 323 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 CATR1Q13166 79 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
MKS1-209ENST00000580127 TPRA1Q86W33 373 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 ELF5Q9UKW6 265 aaPredicted RBP13.37□□□□□ -0.27
MKS1-209ENST00000580127 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
MKS1-209ENST00000580127 IGLV11-55A0A075B6I3 123 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 RBFOX2O43251 390 aaKnown RBP eCLIP13.36□□□□□ -0.27
MKS1-209ENST00000580127 IGLV2-14P01704 120 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 C22orf42Q6IC83 251 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 HSD17B13Q7Z5P4 300 aaPredicted RBP13.36□□□□□ -0.27
MKS1-209ENST00000580127 LYG2Q86SG7 212 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 SPAG16Q8N0X2 631 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 CD300LFQ8TDQ1 290 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 VN1R17PQ8TDU5 208 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 SECTM1Q8WVN6 248 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
MKS1-209ENST00000580127 C6orf62Q9GZU0 229 aaPredicted RBP13.36□□□□□ -0.27
MKS1-209ENST00000580127 KIR2DL5BA0A0G2JN68 375 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 KIR2DL5BA0A0G2JPC4 375 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 A0A0J9YWU9 116 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 TMEM235A6NFC5 223 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 REG1AP05451 166 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 NQO2P16083 231 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 GPR183P32249 361 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 HSPA13P48723 471 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 CMC4P56277 68 aaPredicted RBP13.35□□□□□ -0.27
MKS1-209ENST00000580127 TAS2R31P59538 309 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 THOC7Q6I9Y2 204 aaKnown RBP13.35□□□□□ -0.27
MKS1-209ENST00000580127 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 KIR2DL5AQ8N109 375 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
MKS1-209ENST00000580127 HPRT1P00492 218 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 FGF2P09038 288 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 FCGR2CP31995 323 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 OR2B8PP59922 312 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 EIF4EBP1Q13541 118 aaPredicted RBP13.34□□□□□ -0.27
MKS1-209ENST00000580127 TIMM50Q3ZCQ8 353 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 SPSB3Q6PJ21 355 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 DMBX1Q8NFW5 382 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 ZNF502Q8TBZ5 544 aa13.34□□□□□ -0.27
MKS1-209ENST00000580127 DAZ1Q9NQZ3 744 aaKnown RBP13.34□□□□□ -0.27
MKS1-209ENST00000580127 A0A1B0GW64 132 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 MFSD2BA6NFX1 497 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 OR4C46A6NHA9 309 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 UPK2O00526 184 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 TSPAN4O14817 238 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 BEST4Q8NFU0 473 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 ATP6V0BQ99437 205 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 ZNF436Q9C0F3 470 aaPredicted RBP13.33□□□□□ -0.28
MKS1-209ENST00000580127 SLC5A7Q9GZV3 580 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 CCL28Q9NRJ3 127 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 DAPK2Q9UIK4 370 aa13.33□□□□□ -0.28
MKS1-209ENST00000580127 IGHV3-35A0A0C4DH35 117 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 TGOLN2O43493 480 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 TNFSF12O43508 249 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 TRAPPC2P0DI81 140 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 TRAPPC2BP0DI82 140 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 FGF9P31371 208 aaPredicted RBP13.32□□□□□ -0.28
MKS1-209ENST00000580127 ERVK-16P61578 105 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 DEFB135Q30KP9 77 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 SLC25A24Q6NUK1 477 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 OR13F1Q8NGS4 319 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 RNF183Q96D59 192 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 GALNT14Q96FL9 552 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 BSCL2Q96G97 398 aaPredicted RBP13.32□□□□□ -0.28
MKS1-209ENST00000580127 QTRT1Q9BXR0 403 aaKnown RBP13.32□□□□□ -0.28
MKS1-209ENST00000580127 SSR3Q9UNL2 185 aa13.32□□□□□ -0.28
MKS1-209ENST00000580127 SULT1C2O00338 296 aa13.31□□□□□ -0.28
MKS1-209ENST00000580127 MRPS14O60783 128 aaKnown RBP13.31□□□□□ -0.28
MKS1-209ENST00000580127 POU2AF1Q16633 256 aa13.31□□□□□ -0.28
MKS1-209ENST00000580127 CNBD2Q96M20 576 aa13.31□□□□□ -0.28
MKS1-209ENST00000580127 PLEKHA2Q9HB19 425 aa13.31□□□□□ -0.28
MKS1-209ENST00000580127 RRP15Q9Y3B9 282 aaKnown RBP13.31□□□□□ -0.28
MKS1-209ENST00000580127 TRAV18A0A075B6X5 111 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 IGLC7A0M8Q6 106 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 SMIM30A4D0T7 59 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 K7EMT4 169 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 NDUFA4O00483 81 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 SSX5O60225 188 aa13.3□□□□□ -0.28
MKS1-209ENST00000580127 PPYP01298 95 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms