RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 RAB11BQ15907 218 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 C5orf64Q2M2E5 130 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 C6orf183Q5T699 404 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF660Q6AZW8 331 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 FAM71F2Q6NXP2 309 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 SLC35E3Q7Z769 313 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 MOB3BQ86TA1 216 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 H1FOOQ8IZA3 346 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF565Q8N9K5 539 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 DRAXINQ8NBI3 349 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 OR10X1Q8NGY0 326 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 NEK7Q8TDX7 302 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 CREB3L1Q96BA8 519 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 KCTD7Q96MP8 289 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 NAA50Q9GZZ1 169 aaKnown RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 CST11Q9H112 138 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 FBXL15Q9H469 300 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 C12orf4Q9NQ89 552 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 SDHAF2Q9NX18 166 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 GNG12Q9UBI6 72 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 CKLFQ9UBR5 152 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 TRAPPC2LQ9UL33 140 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 TPRKBQ9Y3C4 175 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 TSSC4Q9Y5U2 329 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-214ENST00000550893 V9GY05 133 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 DNAH17Q9UFH2 4485 aa3.69□□□□□ -1.82
SCAF11-214ENST00000550893 TCRBV4S1A1TA0A5B7 111 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 TMEM235A6NFC5 223 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 C15orf62A8K5M9 175 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 M0QZK8 103 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 NBR2O15453 112 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 TRBV12-3P01733 135 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 OCMP0CE72 109 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 ANXA7P20073 488 aaKnown RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 GALP22466 123 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 PSMA1P25786 263 aaKnown RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 RUNX1Q01196 453 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF45Q02386 682 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 PSG5Q15238 335 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 KCTD21Q4G0X4 260 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 C9orf152Q5JTZ5 239 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 C10orf55Q5SWW7 151 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 GLT8D1Q68CQ7 371 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 SFXN4Q6P4A7 337 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 TRAT1Q6PIZ9 186 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 IL34Q6ZMJ4 242 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 ADAMTSL5Q6ZMM2 481 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 MOB1BQ7L9L4 216 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF491Q8N8L2 437 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 OR10R2Q8NGX6 335 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 OR2T10Q8NGZ9 312 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 THRSPQ92748 146 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 MYCBPQ99417 103 aaPredicted RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 CHCHD6Q9BRQ6 235 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 FAM103A1Q9BTL3 118 aaKnown RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 CCDC90BQ9GZT6 254 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 OR51J1Q9H342 316 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 CHCHD3Q9NX63 227 aaKnown RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 SCN3BQ9NY72 215 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 RDH8Q9NYR8 311 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 RNF150Q9ULK6 438 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 SPATA2Q9UM82 520 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 RRP15Q9Y3B9 282 aaKnown RBP3.68□□□□□ -1.82
SCAF11-214ENST00000550893 NUBP2Q9Y5Y2 271 aa3.68□□□□□ -1.82
SCAF11-214ENST00000550893 A0A087WW49 117 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 TEX13DA0A0J9YY54 714 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-214ENST00000550893 OR5H14A6NHG9 310 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 TRDCB7Z8K6 153 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 FABP7O15540 132 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 TXNL1O43396 289 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 MRPS14O60783 128 aaKnown RBP3.67□□□□□ -1.82
SCAF11-214ENST00000550893 ARL6IP5O75915 188 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 DIRAS3O95661 229 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 CA2P00918 260 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 RAB3BP20337 219 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 PSMB9P28065 219 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 DUTP33316 252 aaKnown RBP3.67□□□□□ -1.82
SCAF11-214ENST00000550893 SDC2P34741 201 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 MNDAP41218 407 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 CDX1P47902 265 aaPredicted RBP3.67□□□□□ -1.82
SCAF11-214ENST00000550893 HSPA13P48723 471 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 CX3CL1P78423 397 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 UBE2V1Q13404 147 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 MED21Q13503 144 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 HES1Q14469 280 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 MMDQ15546 238 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 TRAM1Q15629 374 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 KLK9Q2XQG4 91 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 KIAA1644Q3SXP7 199 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 ZNF695Q8IW36 515 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 GVQW1Q8N7I0 195 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 OR4F17Q8NGA8 305 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 CHPT1Q8WUD6 406 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 C4orf3Q8WVX3 66 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 IL1F10Q8WWZ1 152 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 MRGPRFQ96AM1 343 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 GALMQ96C23 342 aa3.67□□□□□ -1.82
SCAF11-214ENST00000550893 OR4F4Q96R69 305 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms