RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 CEACAM3P40198 252 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 NHLH2Q02577 135 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 RTL8BQ17RB0 113 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 EIF5AL1Q6IS14 154 aaKnown RBP12.08□□□□□ -0.48
SREK1-209ENST00000520953 SUN5Q8TC36 379 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 CD300LFQ8TDQ1 290 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 MS4A7Q9GZW8 240 aaPredicted RBP12.08□□□□□ -0.48
SREK1-209ENST00000520953 CACNG5Q9UF02 275 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 TBL2Q9Y4P3 447 aaKnown RBP12.08□□□□□ -0.48
SREK1-209ENST00000520953 RAB19A4D1S5 217 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 MIDNQ504T8 468 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 TCTEX1D1Q8N7M0 179 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 HARBI1Q96MB7 349 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 MAGT1Q9H0U3 335 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 ARV1Q9H2C2 271 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 TPSG1Q9NRR2 321 aa12.08□□□□□ -0.48
SREK1-209ENST00000520953 J3QLI3 93 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 SSSCA1O60232 199 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 VENTXO95231 258 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 IGKV1D-33P01593 117 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 IGKV1-33P01594 117 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 SULT1A2P50226 295 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 OR2B8PP59922 312 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 ID3Q02535 119 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 FLYWCH2Q96CP2 140 aaKnown RBP12.07□□□□□ -0.48
SREK1-209ENST00000520953 RHOVQ96L33 236 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 TMEM140Q9NV12 185 aa12.07□□□□□ -0.48
SREK1-209ENST00000520953 MED6O75586 246 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 NQO2P16083 231 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 M6PRP20645 277 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 RPS16P62249 146 aaKnown RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 EWSR1Q01844 656 aaKnown RBP eCLIP12.06□□□□□ -0.48
SREK1-209ENST00000520953 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 UQCC3Q6UW78 93 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 PDPNQ86YL7 162 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 MALSU1Q96EH3 234 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 SAT2Q96F10 170 aaPredicted RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 FAM212BQ9NTI7 297 aaPredicted RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 MMP24Q9Y5R2 645 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 FAM24AA6NFZ4 105 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 TXNL1O43396 289 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 FSHBP01225 129 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 SAA1P0DJI8 122 aaPredicted RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 F2RL1P55085 397 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 SRSF3P84103 164 aaKnown RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 AKR1C1Q04828 323 aa12.06□□□□□ -0.48
SREK1-209ENST00000520953 HABP2Q14520 560 aaPredicted RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
SREK1-209ENST00000520953 TMEM50AO95807 157 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 APOC3P02656 99 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 CAV2P51636 162 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 SPINK9Q5DT21 86 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.05□□□□□ -0.48
SREK1-209ENST00000520953 OR4C13Q8NGP0 309 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
SREK1-209ENST00000520953 SLC25A17O43808 307 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 PITX3O75364 302 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
SREK1-209ENST00000520953 MC5RP33032 325 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 DHRS7BQ6IAN0 325 aaPredicted RBP12.05□□□□□ -0.48
SREK1-209ENST00000520953 EAF1Q96JC9 268 aaPredicted RBP12.05□□□□□ -0.48
SREK1-209ENST00000520953 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 HRH4Q9H3N8 390 aa12.05□□□□□ -0.48
SREK1-209ENST00000520953 LYRM2Q9NU23 88 aaPredicted RBP12.05□□□□□ -0.48
SREK1-209ENST00000520953 NAV3Q8IVL0 2385 aa12.04□□□□□ -0.48
SREK1-209ENST00000520953 BORCS7-ASMTA0A0B4J1R7 106 aa12.04□□□□□ -0.48
SREK1-209ENST00000520953 NUDT19A8MXV4 375 aa12.04□□□□□ -0.48
SREK1-209ENST00000520953 PJVKQ0ZLH3 352 aa12.04□□□□□ -0.48
SREK1-209ENST00000520953 HES1Q14469 280 aa12.04□□□□□ -0.48
SREK1-209ENST00000520953 ATRAIDQ6UW56 229 aa12.04□□□□□ -0.48
SREK1-209ENST00000520953 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
SREK1-209ENST00000520953 OPN1MWP04001 364 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 CD1BP29016 333 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 ERVK-16P61578 105 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 RELBQ01201 579 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 MRGPRG-AS1Q2M3A8 158 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 IL34Q6ZMJ4 242 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
SREK1-209ENST00000520953 PIFOQ8TCI5 191 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 A0A1B0GU03 582 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 TMEM218A2RU14 115 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 CHST1O43916 411 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 SEC11BP0C7V7 166 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 SPP1P10451 314 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 SLC25A6P12236 298 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 ARHGDIBP52566 201 aa12.03□□□□□ -0.48
SREK1-209ENST00000520953 VAMP2P63027 116 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms