RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 OR4A47Q6IF82 309 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 UXS1Q8NBZ7 420 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 OR13F1Q8NGS4 319 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 EEF1AKMT3Q96AZ1 226 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 SLC25A38Q96DW6 304 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 YTHDF1Q9BYJ9 559 aaKnown RBP9.99□□□□□ -0.81
CPSF4-210ENST00000469897 SLC5A7Q9GZV3 580 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 SRD5A3Q9H8P0 318 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 HRASLSQ9HDD0 168 aa9.99□□□□□ -0.81
CPSF4-210ENST00000469897 ATP6V1G2O95670 118 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 HIST1H1BP16401 226 aaKnown RBP9.98□□□□□ -0.81
CPSF4-210ENST00000469897 FXYD4P59646 89 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 KLK9Q2XQG4 91 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 ZBTB34Q8NCN2 500 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 AIFM2Q9BRQ8 373 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 AUNIPQ9H7T9 357 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 BET1LQ9NYM9 111 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 MLXQ9UH92 298 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 KLK9Q9UKQ9 250 aa9.98□□□□□ -0.81
CPSF4-210ENST00000469897 IGLV11-55A0A075B6I3 123 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 TMEM213A2RRL7 107 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 MFSD2BA6NFX1 497 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 UPK2O00526 184 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 SCAF4O95104 1147 aaKnown RBP9.97□□□□□ -0.81
CPSF4-210ENST00000469897 HPRT1P00492 218 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 RPA2P15927 270 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 OR2B8PP59922 312 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 MSMO1Q15800 293 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 TIMM50Q3ZCQ8 353 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 TM4SF20Q53R12 229 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 ZNF57Q68EA5 555 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-210ENST00000469897 TMEM61Q8N0U2 210 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 GIMAP1Q8WWP7 306 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 Q9H521 79 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 DIABLOQ9NR28 239 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 ETV7Q9Y603 341 aa9.97□□□□□ -0.81
CPSF4-210ENST00000469897 SACSQ9NZJ4 4579 aa9.96□□□□□ -0.81
CPSF4-210ENST00000469897 TRBV7-1A0A0A6YYK4 115 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 IGHV3-35A0A0C4DH35 117 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 MEIS3P1A6NDR6 274 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 SCAND1P57086 179 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 TAS2R31P59538 309 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 ZNF585BQ52M93 769 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 UNQ9165/PRO28630Q6UXU0 137 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 ZNF818PQ6ZRF7 136 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 SLC16A13Q7RTY0 426 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 OR5AP2Q8NGF4 316 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 OR10W1Q8NGF6 305 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 IL17DQ8TAD2 202 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 CXorf58Q96LI9 332 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 COMMD5Q9GZQ3 224 aa9.96□□□□□ -0.82
CPSF4-210ENST00000469897 A0A0A6YYH2 397 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 TEX50A0A1B0GTY4 177 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 IGLC7A0M8Q6 106 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 A6NJ64 397 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 RBFOX2O43251 390 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPSF4-210ENST00000469897 NQO2P16083 231 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 GNRHRP30968 328 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 GPR183P32249 361 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 CATR1Q13166 79 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 NEDD8Q15843 81 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 PLET1Q6UQ28 207 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 BTNL8Q6UX41 500 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 TMEM17Q86X19 198 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 OR52B4Q8NGK2 314 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 OR51H1Q8NH63 302 aa9.95□□□□□ -0.82
CPSF4-210ENST00000469897 CSMD3Q7Z407 3707 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 A8MWP6 167 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 S1PR2O95136 353 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.82
CPSF4-210ENST00000469897 TGFBR1P36897 503 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 CBX5P45973 191 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 RFX2P48378 723 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 POU2AF1Q16633 256 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 AADACL3Q5VUY0 350 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 SLC25A24Q6NUK1 477 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 DHRS11Q6UWP2 260 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 DMBX1Q8NFW5 382 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 ZNF502Q8TBZ5 544 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 S100A16Q96FQ6 103 aaKnown RBP9.94□□□□□ -0.82
CPSF4-210ENST00000469897 TMEM140Q9NV12 185 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 THYN1Q9P016 225 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 DNAH1Q9P2D7 4330 aa9.94□□□□□ -0.82
CPSF4-210ENST00000469897 XRCC3O43542 346 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-210ENST00000469897 PMP2P02689 132 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 TRAPPC2P0DI81 140 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 TRAPPC2BP0DI82 140 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 C8orf88P0DMB2 117 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 OR13C7P0DN81 318 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 ANKRD55Q3KP44 614 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
CPSF4-210ENST00000469897 CD300LFQ8TDQ1 290 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 QTRT1Q9BXR0 403 aaKnown RBP9.93□□□□□ -0.82
CPSF4-210ENST00000469897 PLEKHA2Q9HB19 425 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 MRPL27Q9P0M9 148 aaKnown RBP9.93□□□□□ -0.82
CPSF4-210ENST00000469897 STARD9Q9P2P6 4700 aa9.93□□□□□ -0.82
CPSF4-210ENST00000469897 LOC102724200A0A096LPH7 203 aaPredicted RBP9.92□□□□□ -0.82
CPSF4-210ENST00000469897 IGHV3-21A0A0B4J1V1 117 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms