RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 LGALS14Q8TCE9 139 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 SECTM1Q8WVN6 248 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 HRASLSQ9HDD0 168 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 CCL28Q9NRJ3 127 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 RHBDL2Q9NX52 303 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 RAB26Q9ULW5 256 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 SSR3Q9UNL2 185 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 SELENOKQ9Y6D0 94 aa17.06■□□□□ 0.32
USP42-205ENST00000465073 RBFOX2O43251 390 aaKnown RBP eCLIP17.05■□□□□ 0.32
USP42-205ENST00000465073 REG1AP05451 166 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 MYOD1P15172 320 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 PSMB9P28065 219 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 FCGR2CP31995 323 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 TIMM50Q3ZCQ8 353 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 SPAG16Q8N0X2 631 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 BEST4Q8NFU0 473 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 MARC2Q969Z3 335 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 GGTLC1Q9BX51 225 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 TRAV25A0A0B4J276 109 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 MFSD2BA6NFX1 497 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 CGB1A6NKQ9 187 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 TNFSF12O43508 249 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 SCAND1P57086 179 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 OR2B8PP59922 312 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 SPARTQ8N0X7 666 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 OR13F1Q8NGS4 319 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 FCGR1BQ92637 280 aa17.05■□□□□ 0.32
USP42-205ENST00000465073 SCAF4O95104 1147 aaKnown RBP17.04■□□□□ 0.32
USP42-205ENST00000465073 TM4SF20Q53R12 229 aa17.04■□□□□ 0.32
USP42-205ENST00000465073 HOGA1Q86XE5 327 aa17.04■□□□□ 0.32
USP42-205ENST00000465073 SRSF8Q9BRL6 282 aaKnown RBP17.04■□□□□ 0.32
USP42-205ENST00000465073 OVOL2Q9BRP0 275 aa17.04■□□□□ 0.32
USP42-205ENST00000465073 TRAV18A0A075B6X5 111 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 LOC102724200A0A096LPH7 203 aaPredicted RBP17.03■□□□□ 0.32
USP42-205ENST00000465073 PPYP01298 95 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 C8orf88P0DMB2 117 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 TAS2R31P59538 309 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 BTNL8Q6UX41 500 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 ZNF502Q8TBZ5 544 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 SLC5A7Q9GZV3 580 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 THYN1Q9P016 225 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 ETV7Q9Y603 341 aa17.03■□□□□ 0.32
USP42-205ENST00000465073 IGLC7A0M8Q6 106 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 SULT1C2O00338 296 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 SDC2P34741 201 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 ELLP55199 621 aaPredicted RBP17.02■□□□□ 0.32
USP42-205ENST00000465073 CATR1Q13166 79 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 POU2AF1Q16633 256 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 UNQ9165/PRO28630Q6UXU0 137 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 RBPMS2Q6ZRY4 209 aaKnown RBP17.02■□□□□ 0.32
USP42-205ENST00000465073 GVQW1Q8N7I0 195 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 COMMD5Q9GZQ3 224 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 MRPL27Q9P0M9 148 aaKnown RBP17.02■□□□□ 0.32
USP42-205ENST00000465073 UFC1Q9Y3C8 167 aa17.02■□□□□ 0.32
USP42-205ENST00000465073 HYDINQ4G0P3 5121 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 A0A0A6YYH2 397 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 A6NJ64 397 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 UPK2O00526 184 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 HPRT1P00492 218 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 FGF2P09038 288 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 PTHLHP12272 177 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 NQO2P16083 231 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 PTBP1P26599 531 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP42-205ENST00000465073 ZNF585BQ52M93 769 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 PLET1Q6UQ28 207 aa17.01■□□□□ 0.31
USP42-205ENST00000465073 CYB5BO43169 146 aa17■□□□□ 0.31
USP42-205ENST00000465073 GPR183P32249 361 aa17■□□□□ 0.31
USP42-205ENST00000465073 OR1L6Q8NGR2 347 aa17■□□□□ 0.31
USP42-205ENST00000465073 CD300LFQ8TDQ1 290 aa17■□□□□ 0.31
USP42-205ENST00000465073 SLC25A38Q96DW6 304 aa17■□□□□ 0.31
USP42-205ENST00000465073 TRAV3A0A0B4J244 114 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 ZNF773Q6PK81 442 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 OR5H6Q8NGV6 325 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 VN1R17PQ8TDU5 208 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 GIMAP1Q8WWP7 306 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 C5orf66Q9H5L9 145 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 PLEKHA2Q9HB19 425 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 MXD1Q05195 221 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 SLC38A6Q8IZM9 456 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 OR2C3Q8N628 320 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 QTRT1Q9BXR0 403 aaKnown RBP16.99■□□□□ 0.31
USP42-205ENST00000465073 ZNF436Q9C0F3 470 aaPredicted RBP16.99■□□□□ 0.31
USP42-205ENST00000465073 AUNIPQ9H7T9 357 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 DIABLOQ9NR28 239 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 TMEM140Q9NV12 185 aa16.99■□□□□ 0.31
USP42-205ENST00000465073 CLEC2LP0C7M8 214 aa16.98■□□□□ 0.31
USP42-205ENST00000465073 CBX5P45973 191 aa16.98■□□□□ 0.31
USP42-205ENST00000465073 FXYD4P59646 89 aa16.98■□□□□ 0.31
USP42-205ENST00000465073 IDNKQ5T6J7 187 aa16.98■□□□□ 0.31
USP42-205ENST00000465073 THOC7Q6I9Y2 204 aaKnown RBP16.98■□□□□ 0.31
USP42-205ENST00000465073 DMBX1Q8NFW5 382 aa16.98■□□□□ 0.31
USP42-205ENST00000465073 SPAG8Q99932 426 aaPredicted RBP16.98■□□□□ 0.31
USP42-205ENST00000465073 YTHDF1Q9BYJ9 559 aaKnown RBP16.98■□□□□ 0.31
USP42-205ENST00000465073 IGHV3-35A0A0C4DH35 117 aa16.97■□□□□ 0.31
USP42-205ENST00000465073 ZNF818PQ6ZRF7 136 aa16.97■□□□□ 0.31
USP42-205ENST00000465073 HSD17B13Q7Z5P4 300 aaPredicted RBP16.97■□□□□ 0.31
USP42-205ENST00000465073 OR5AP2Q8NGF4 316 aa16.97■□□□□ 0.31
USP42-205ENST00000465073 OR51H1Q8NH63 302 aa16.97■□□□□ 0.31
USP42-205ENST00000465073 BORCS5Q969J3 196 aa16.97■□□□□ 0.31
USP42-205ENST00000465073 TP53TG1Q9Y2A0 90 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms