RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MBD3L4A6NDZ8 208 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-201ENST00000380701 MBD3L3A6NE82 208 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-201ENST00000380701 MBD3L5A6NJ08 208 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-201ENST00000380701 CDX1P47902 265 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-201ENST00000380701 MBD3L2Q8NHZ7 208 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-201ENST00000380701 IGHV3-21A0A0B4J1V1 117 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 IGHG3P01860 377 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 RCC1P18754 421 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 LINC01559Q495D7 138 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 TMEM155Q4W5P6 130 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 TMEM88Q6PEY1 159 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF841Q6ZN19 808 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 REC114Q7Z4M0 266 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 STHQ8IWL8 128 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 OR11H4Q8NGC9 324 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 DUX3Q96PT4 197 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 SOSTQ9BQB4 213 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 PLA2G10O15496 165 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 NTN1O95631 604 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 SOD3P08294 240 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 VSIG10L2P0DP72 767 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF660Q6AZW8 331 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 FAM71F2Q6NXP2 309 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 MRPL13Q9BYD1 178 aaKnown RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 CEBPDP49716 269 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ERVK11-1P61568 191 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 PKIAP61925 76 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 PRSS8Q16651 343 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 FOXB2Q5VYV0 432 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 TCF23Q7RTU1 214 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 FBXL15Q9H469 300 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 UPK2O00526 184 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 F12P00748 615 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 APELAP0DMC3 54 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 GCHFRP30047 84 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 CACNG7P62955 275 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 OR8A1Q8NGG7 326 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF502Q8TBZ5 544 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 RTN4RQ9BZR6 473 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 GCM2O75603 506 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 CA2P00918 260 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 CELA3AP09093 270 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 NBEAP1P0C6P0 100 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ASPHD2Q6ICH7 369 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 TMEM144Q7Z5S9 345 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 C9orf62Q8N4C0 152 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 FAM216BQ8N7L0 139 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ZNRF1Q8ND25 227 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 SRSF8Q9BRL6 282 aaKnown RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 OTORQ9NRC9 128 aa6.04□□□□□ -1.44
CCDC171-201ENST00000380701 FOXA2Q9Y261 457 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-201ENST00000380701 ZG16O60844 167 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 SMIM6P0DI80 62 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 NHLRC3Q5JS37 347 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 C12orf54Q6X4T0 127 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 ITLN2Q8WWU7 325 aaPredicted RBP6.03□□□□□ -1.44
CCDC171-201ENST00000380701 USMG5Q96IX5 58 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 MCRIP2Q9BUT9 160 aaKnown RBP6.03□□□□□ -1.44
CCDC171-201ENST00000380701 WNK3Q9BYP7 1800 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 MCM3APO60318 1980 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 NDUFB4O95168 129 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 SRSF12Q8WXF0 261 aaKnown RBP6.03□□□□□ -1.44
CCDC171-201ENST00000380701 SLC25A38Q96DW6 304 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 ST6GAL2Q96JF0 529 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 BRWD1Q9NSI6 2320 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 C2orf68Q2NKX9 166 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 TMEM183AQ8IXX5 376 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 NEU1Q99519 415 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 J3QLI3 93 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 HLA-DRB1P01911 266 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 AMBPP02760 352 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 SPINK2P20155 84 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 LINC01356Q8N9X3 169 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 CACNA1CQ13936 2221 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 TRIP11Q15643 1979 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 TRBV6-7A0A0A0MS04 114 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 J3QKU1 62 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 LDLRAD2Q5SZI1 272 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 ZNF818PQ6ZRF7 136 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 OR52E5Q8NH55 327 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 LINC01587Q99440 93 aa6.03□□□□□ -1.44
CCDC171-201ENST00000380701 TRGV2A0A075B6R0 118 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 ZP1P60852 638 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 HBBP68871 147 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 LINC00305Q7Z4B0 112 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 ARFGEF1Q9Y6D6 1849 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 RBBP6Q7Z6E9 1792 aaKnown RBP6.02□□□□□ -1.45
CCDC171-201ENST00000380701 LINC00587B1AMM8 73 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 WBP1Q96G27 269 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 C12orf57Q99622 126 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 TAF1LQ8IZX4 1826 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 TRAV21A0A0B4J279 112 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 TMEM262E9PQX1 116 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 LEPROTL1O95214 131 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 CDKN1AP38936 164 aa6.02□□□□□ -1.45
CCDC171-201ENST00000380701 SUMO2P61956 95 aaKnown RBP6.02□□□□□ -1.45
CCDC171-201ENST00000380701 SNRPEP62304 92 aaKnown RBP6.02□□□□□ -1.45
CCDC171-201ENST00000380701 ZNF79Q15937 498 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms