RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 VSIRQ9H7M9 311 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 ENY2Q9NPA8 101 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 KCNIP2Q9NS61 270 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 SLC35D1Q9NTN3 355 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM14BQ9NUH8 114 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 SLC39A9Q9NUM3 307 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 FKBP11Q9NYL4 201 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 WDR83OSQ9Y284 106 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 ZNF257Q9Y2Q1 563 aa8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 DIDO1Q9BTC0 2240 aaKnown RBP8.58□□□□□ -1.04
POLR2J3-201ENST00000379340 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 FAM90A27PA6NNH2 459 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 MMP23AO75900 390 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 SNRNP70P08621 437 aaKnown RBP8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 CD1BP29016 333 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 ELLP55199 621 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 ACOT6Q3I5F7 207 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM200BQ69YZ2 307 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 FAM122CQ6P4D5 195 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 ETV3LQ6ZN32 361 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 ZCCHC24Q8N2G6 241 aaKnown RBP8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 OSR1Q8TAX0 266 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 RXFP4Q8TDU9 374 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 PLCE1Q9P212 2302 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 POLEQ07864 2286 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
POLR2J3-201ENST00000379340 A0A087X0M5 115 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 A0A1B0GX30 115 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 FNDC10F2Z333 226 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 CYB5BO43169 146 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 CT45A6P0DMU7 189 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 CT45A5P0DMU8 189 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 CT45A7P0DMV0 189 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 FOLR2P14207 255 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 PPOXP50336 477 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 FFAR4Q5NUL3 377 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 UTF1Q5T230 341 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 ACSM6Q6P461 480 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 LCN15Q6UWW0 184 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 OR10G9Q8NGN4 311 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 OR10G7Q8NGN6 311 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 OR13D1Q8NGV5 346 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 H1FXQ92522 213 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 NEUROG1Q92886 237 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 LHX4Q969G2 390 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM186Q96B77 213 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 GNG13Q9P2W3 67 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 VAX2Q9UIW0 290 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 NAV3Q8IVL0 2385 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 MED13LQ71F56 2210 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 A0A087WWC5 75 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TRAV3A0A0B4J244 114 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 PRSS46E5RG02 174 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 UPK2O00526 184 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 DVL1O14640 695 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 IL3RAP26951 378 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 LOXP28300 417 aaPredicted RBP8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 ZNF137PP52743 207 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TFF3Q07654 80 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM249Q2WGJ8 235 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 ZNF672Q499Z4 452 aaPredicted RBP8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM155Q4W5P6 130 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TMEM177Q53S58 311 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 AVPI1Q5T686 147 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 LYPD2Q6UXB3 125 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 SLC35E3Q7Z769 313 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 VKORC1L1Q8N0U8 176 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 MUC15Q8N387 334 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 RPP25LQ8N5L8 163 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 SLC24A4Q8NFF2 622 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 OR4A5Q8NH83 315 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 RAB1CQ92928 201 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TNFRSF14Q92956 283 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 TVP23CQ96ET8 276 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 NEIL1Q96FI4 390 aaPredicted RBP8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 NIPSNAP3BQ9BS92 247 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 PCGF1Q9BSM1 259 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 MANBALQ9NQG1 85 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 MLXQ9UH92 298 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 OR51B2Q9Y5P1 312 aa8.56□□□□□ -1.04
POLR2J3-201ENST00000379340 A0A1W2PPH5 198 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 ZFP92A6NM28 416 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 COLCA2A8K830 154 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 B4DEV8 164 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 SEC14L6B5MCN3 397 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 H3BQ15 152 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 KBTBD11O94819 623 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 MT-ND4LP03901 98 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 CCL3L1P16619 93 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 NPY1RP25929 384 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 OPRK1P41145 380 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 DLX6P56179 175 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 PRCDQ00LT1 54 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 PNRC1Q12796 327 aaPredicted RBP8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 RNF212Q495C1 297 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 AKIRIN2Q53H80 203 aa8.55□□□□□ -1.04
POLR2J3-201ENST00000379340 SSX7Q7RTT5 188 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms