RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 DANCRP0C864 163 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 KCNMB1Q16558 191 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 TTC9CQ8N5M4 171 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 TPRX1Q8N7U7 411 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF841Q6ZN19 808 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 U3KQE9 123 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 A0A0G2JMM0 328 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 A0A1W2PPB8 328 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 KIR3DP1A8MWS1 328 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM27E3Q08E93 113 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM160Q9NX00 188 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 A6NNC1 897 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 A8MWL6 223 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 RRHO14718 337 aa11.36□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM8BA6NDV4 472 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF708P17019 499 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 MPV17P39210 176 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 RND3P61587 244 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 MRPL18Q9H0U6 180 aaKnown RBP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 PIN1P1O15428 100 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 Q5BKY6 102 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 TAF15Q92804 592 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 IGLV3-12A0A075B6K2 115 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A18PA6NE21 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A16PA6NEW6 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A20PA6NIJ5 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A8PA6NJQ4 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A22PA8MWA6 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A12PA8MX19 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A5PA8MXJ8 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 UBE2L6O14933 153 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A15PP0C7V4 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A13PP0C7W8 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A14PP0C7W9 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 FAM90A24PP0C7X0 464 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 EVI2AP22794 236 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GLIPR1P48060 266 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 RPS11P62280 158 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 SDHCQ99643 169 aaPredicted RBP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM229AB2RXF0 380 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 TGFBR3LH3BV60 316 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 CD8AP01732 235 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 AMY1AP04745 511 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 APELAP0DMC3 54 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 LCN2P80188 198 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 HIGD1AQ9Y241 93 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 PPIAL4CA0A0B4J2A2 164 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE12JA6NER3 117 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE7O76087 117 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE12FP0CL80 117 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE12GP0CL81 117 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE12IP0CL82 117 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 PPIAL4GP0DN37 164 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 GAGE4Q13068 117 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 C10orf128Q5T292 105 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 AMELYQ99218 206 aa11.35□□□□□ -0.59
RAPGEF1-201ENST00000372189 C17orf51A8MQB3 221 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 LEPROTL1O95214 131 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 UCP1P25874 307 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 CACNA1CQ13936 2221 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 IFITM1P13164 125 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 PRNTQ86SH4 94 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZNF645Q8N7E2 425 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 MRPS18CQ9Y3D5 142 aaKnown RBP11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 ZIC3O60481 467 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 CFHR1Q03591 330 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 TMEM155Q4W5P6 130 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 UBE2V1Q13404 147 aa11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 MBNL3Q9NUK0 354 aaKnown RBP11.34□□□□□ -0.59
RAPGEF1-201ENST00000372189 LOC102723996A0A087X1L8 192 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 FAM90A26D6RGX4 464 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 LY6DQ14210 128 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 CARHSP1Q9Y2V2 147 aaKnown RBP11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 AUP1Q9Y679 476 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 PGLYRP1O75594 196 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 IDI2-AS1Q9NZ38 188 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 J3QW42 95 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 FOXH1O75593 365 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 TMEM50AO95807 157 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 EGR4Q05215 589 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 PDCD11Q14690 1871 aaKnown RBP11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 HYPMO75409 117 aa11.33□□□□□ -0.6
RAPGEF1-201ENST00000372189 AGAP20933 346 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms