RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 OCIAD2Q56VL3 154 aa13.8□□□□□ -0.2
CDC42EP4-201ENST00000335793 MANBALQ9NQG1 85 aa13.8□□□□□ -0.2
CDC42EP4-201ENST00000335793 MBNL3Q9NUK0 354 aaKnown RBP13.8□□□□□ -0.2
CDC42EP4-201ENST00000335793 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 TMEM178AQ8NBL3 297 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 OR13A1Q8NGR1 328 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 CST9LQ9H4G1 147 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 NPIPB11E5RHQ5 1161 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 IMMP2LQ96T52 175 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 K7EP13 123 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 M0R1X1 148 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 KCNIP4Q6PIL6 250 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 CORO2AQ92828 525 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 HIPK2Q9H2X6 1198 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 WIPI2Q9Y4P8 454 aa13.79□□□□□ -0.2
CDC42EP4-201ENST00000335793 A0A1W2PNU3 283 aaPredicted RBP13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 PGPEP1LA6NFU8 196 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 NDUFB4O95168 129 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 PFN1P07737 140 aaKnown RBP13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 ERVK11-1P61568 191 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 TMEM238LA0A1B0GVL6 79 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 LINC00473A8K010 186 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 ZBTB34Q8NCN2 500 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 OR2Z1Q8NG97 314 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 TAAR6Q96RI8 345 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 MEGF9Q9H1U4 602 aa13.78□□□□□ -0.2
CDC42EP4-201ENST00000335793 SUMO1P63165 101 aaKnown RBP13.77□□□□□ -0.2
CDC42EP4-201ENST00000335793 SP5Q6BEB4 398 aaPredicted RBP13.77□□□□□ -0.2
CDC42EP4-201ENST00000335793 LRRC29Q8WV35 223 aa13.77□□□□□ -0.2
CDC42EP4-201ENST00000335793 DMXL1Q9Y485 3027 aa13.77□□□□□ -0.2
CDC42EP4-201ENST00000335793 TMEM250H0YL14 139 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 CLDN14O95500 239 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 CD1BP29016 333 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 ERVK-16P61578 105 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 HES3Q5TGS1 186 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 ORAOV1Q8WV07 137 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 ZNF891A8MT65 544 aaPredicted RBP13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 HRASP01112 189 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 SMIM21Q3B7S5 101 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 SSMEM1Q8WWF3 244 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 C20orf144Q9BQM9 153 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 TP73-AS1Q9UF72 201 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 COX11Q9Y6N1 276 aa13.77□□□□□ -0.21
CDC42EP4-201ENST00000335793 ASPMQ8IZT6 3477 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 MLNRO43193 412 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 ATP5G3P48201 142 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 SLC24A4Q8NFF2 622 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 COQ2Q96H96 371 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 GP6Q9HCN6 339 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 TIMM9Q9Y5J7 89 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 STARD4Q96DR4 205 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 LOC400499M0QZD8 3231 aa13.76□□□□□ -0.21
CDC42EP4-201ENST00000335793 IGHV3OR15-7A0A075B7D8 119 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 A0A1W2PN81 502 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 ZNF718Q3SXZ3 478 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 COA6Q5JTJ3 125 aaKnown RBP13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 PRR27Q6MZM9 219 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 BAGE3Q86Y29 109 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 BAGE2Q86Y30 109 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 ABHD12Q8N2K0 398 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 SAP30O75446 220 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 GABRA6Q16445 453 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 PEAR1Q5VY43 1037 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 SLC35E4Q6ICL7 350 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 OR4A47Q6IF82 309 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 ACP7Q6ZNF0 438 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 Q6ZR03 302 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 LHFPL4Q7Z7J7 247 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 LEAP2Q969E1 77 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 C5orf30Q96GV9 206 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 DERL1Q9BUN8 251 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 IQCF6A8MYZ5 107 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 VWA1Q6PCB0 445 aa13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 TNRC6AQ8NDV7 1962 aaKnown RBP13.75□□□□□ -0.21
CDC42EP4-201ENST00000335793 F2Z2F3 143 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 INTS1Q8N201 2190 aaKnown RBP13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 MIC13Q5XKP0 118 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 INO80CQ6PI98 192 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 ANAPC16Q96DE5 110 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 HSD17B10Q99714 261 aaKnown RBP13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 RNF114Q9Y508 228 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 MDFIC2A0A1B0GVS7 189 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 DIRC3C9JPN6 131 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 GNG7O60262 68 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 OR9G9P0C7N8 305 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 MDS2Q8NDY4 140 aa13.74□□□□□ -0.21
CDC42EP4-201ENST00000335793 PLCE1Q9P212 2302 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 SERF1AO75920 110 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 WISP2O76076 250 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 PPBPP02775 128 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 PRDX2P32119 198 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 FOXF2Q12947 444 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms