RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
HMGN3-203ENST00000620514 TAS2R20P59543 309 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 MSMO1Q15800 293 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 RPEL1Q2QD12 228 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 UBE2NLQ5JXB2 153 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 CROCCP3Q8IVE0 287 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 SAMD12Q8N8I0 201 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 S100A16Q96FQ6 103 aaKnown RBP13.09□□□□□ -0.31
HMGN3-203ENST00000620514 FYTTD1Q96QD9 318 aaKnown RBP13.09□□□□□ -0.31
HMGN3-203ENST00000620514 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 IFT46Q9NQC8 304 aa13.09□□□□□ -0.31
HMGN3-203ENST00000620514 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 BMPR1BO00238 502 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 SULT1C2O00338 296 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 HRASP01112 189 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 CSN3P07498 182 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 KIR2DS2P43631 304 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 TMEM17Q86X19 198 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 Q8N1Y9 231 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 GIMAP1Q8WWP7 306 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 TENM3Q9P273 2699 aa13.08□□□□□ -0.32
HMGN3-203ENST00000620514 ZNF735P0CB33 412 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 AREGP15514 252 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 RFX2P48378 723 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 TMEM69Q5SWH9 247 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 OR4A47Q6IF82 309 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 SLC25A42Q86VD7 318 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 NECAP1Q8NC96 275 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 SLC2A9Q9NRM0 540 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 EHFQ9NZC4 300 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 ANAPC10Q9UM13 185 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
HMGN3-203ENST00000620514 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
HMGN3-203ENST00000620514 CGB1A6NKQ9 187 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 NPIPB5A8MRT5 1133 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 PMP2P02689 132 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 MAS1LP35410 378 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 NCS1P62166 190 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 RPL8P62917 257 aaKnown RBP13.06□□□□□ -0.32
HMGN3-203ENST00000620514 TATDN3Q17R31 274 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 OR51H1Q8NH63 302 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 SLC25A46Q96AG3 418 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
HMGN3-203ENST00000620514 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 DPPA5A6NC42 116 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 PPP5D1E7EU14 171 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 RBFOX2O43251 390 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGN3-203ENST00000620514 NDUFB8O95169 186 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 IGHV3-23P01764 117 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 REG1AP05451 166 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 EIF4EP06730 217 aaKnown RBP13.05□□□□□ -0.32
HMGN3-203ENST00000620514 IGHV4-30-4P0DP06 118 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 HLA-GP17693 338 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 GNRHRP30968 328 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 HERV-K104P61576 105 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 CATR1Q13166 79 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 FANCD2OSQ96PS1 177 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 ZNF2Q9BSG1 426 aaPredicted RBP13.05□□□□□ -0.32
HMGN3-203ENST00000620514 FUNDC2Q9BWH2 189 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 HRASLSQ9HDD0 168 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 BET1LQ9NYM9 111 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 DMRT1Q9Y5R6 373 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 S4R3C0 116 aa13.05□□□□□ -0.32
HMGN3-203ENST00000620514 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 IZUMO1RA6ND01 250 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 S1PR2O95136 353 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 HPRT1P00492 218 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 HLA-AP01891 365 aaKnown RBP13.04□□□□□ -0.32
HMGN3-203ENST00000620514 CRYGCP07315 174 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 RPA2P15927 270 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 NAT1P18440 290 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 PSMB6P28072 239 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 TAS2R31P59538 309 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 VBP1P61758 197 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 AADACL3Q5VUY0 350 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 DHRS11Q6UWP2 260 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 ADAMTSL5Q6ZMM2 481 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 OR4A5Q8NH83 315 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 RCHY1Q96PM5 261 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 COMMD3Q9UBI1 195 aa13.04□□□□□ -0.32
HMGN3-203ENST00000620514 H0Y980 276 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 UPK2O00526 184 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 NQO2P16083 231 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 CTRB1P17538 263 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 EDN2P20800 178 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 PRSS3P35030 304 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 MECP2P51608 486 aaKnown RBP13.03□□□□□ -0.32
HMGN3-203ENST00000620514 OR2B8PP59922 312 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 POU2AF1Q16633 256 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 CTRB2Q6GPI1 263 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 LYSMD2Q8IV50 215 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 OR5H2Q8NGV7 314 aa13.03□□□□□ -0.32
HMGN3-203ENST00000620514 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms