RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 A6NNC1 897 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 IL6RP08887 468 aaPredicted RBP12.38□□□□□ -0.43
VPS36-207ENST00000611132 MAS1LP35410 378 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 ZNF324BQ6AW86 544 aaPredicted RBP12.38□□□□□ -0.43
VPS36-207ENST00000611132 MOGAT3Q86VF5 341 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 TTTY12Q9BZ98 90 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 ZNF581Q9P0T4 197 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 CORTO00230 105 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 AGFG2O95081 481 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 IGLV3-19P01714 112 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 LINC00869P0C866 280 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 MPV17P39210 176 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 ARL16Q0P5N6 197 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 EREGO14944 169 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 SRSF7Q16629 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS36-207ENST00000611132 AGMATQ9BSE5 352 aa12.38□□□□□ -0.43
VPS36-207ENST00000611132 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
VPS36-207ENST00000611132 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
VPS36-207ENST00000611132 HES3Q5TGS1 186 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 SSBP3Q9BWW4 388 aaPredicted RBP12.37□□□□□ -0.43
VPS36-207ENST00000611132 AMMECR1Q9Y4X0 333 aaPredicted RBP12.37□□□□□ -0.43
VPS36-207ENST00000611132 NRN1LQ496H8 165 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 SLC35E4Q6ICL7 350 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 VKORC1L1Q8N0U8 176 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 ZADH2Q8N4Q0 377 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 RRHO14718 337 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 NDUFB3O43676 98 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 SSTR5P35346 364 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 TFPI2P48307 235 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 LYZP61626 148 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 TDHQ8IZJ6 230 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 TMEM256Q8N2U0 113 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 ZNF355PQ9NSJ1 428 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 KIAA2026Q5HYC2 2103 aa12.37□□□□□ -0.43
VPS36-207ENST00000611132 CGAP01215 116 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 PTGDSP41222 190 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 OR8B3Q8NGG8 313 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
VPS36-207ENST00000611132 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 OR8B2Q96RD0 313 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 IGHV3OR15-7A0A075B7D8 119 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.36□□□□□ -0.43
VPS36-207ENST00000611132 RFPL3SP0C7P2 107 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 FAM19A2Q8N3H0 131 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 OR8A1Q8NGG7 326 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
VPS36-207ENST00000611132 AKIRIN1Q9H9L7 192 aaPredicted RBP12.36□□□□□ -0.43
VPS36-207ENST00000611132 OTX1P32242 354 aaPredicted RBP12.36□□□□□ -0.43
VPS36-207ENST00000611132 FOXL1Q12952 345 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 LRRC10Q5BKY1 277 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 MS4A5Q9H3V2 200 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 CDC42EP3Q9UKI2 254 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 LINC00271P0C7V0 271 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 TEX38Q6PEX7 206 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 MOB3BQ86TA1 216 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 LINC01551Q86U37 167 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 OCC1Q8TAD7 63 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
VPS36-207ENST00000611132 TRAV24A0A0B4J272 114 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 EPOPA6NHQ4 379 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 PLPPR1Q8TBJ4 325 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 PRDM13Q9H4Q3 707 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 SHANK1Q9Y566 2161 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 TMEM97Q5BJF2 176 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 TMEM265A0A087WTH1 108 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
VPS36-207ENST00000611132 SELENOTP62341 195 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 ZIC4Q8N9L1 334 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 HSPB7Q9UBY9 170 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 DOCK11Q5JSL3 2073 aa12.35□□□□□ -0.43
VPS36-207ENST00000611132 WISP1O95388 367 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 ACSF3Q4G176 576 aaPredicted RBP12.34□□□□□ -0.43
VPS36-207ENST00000611132 RND1Q92730 232 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 JPT1Q9UK76 154 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 PFN1P07737 140 aaKnown RBP12.34□□□□□ -0.43
VPS36-207ENST00000611132 LINC00614P0C842 121 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 SIGLEC12Q96PQ1 595 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 PPP1R14DQ9NXH3 145 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 WFDC8Q8IUA0 241 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 WDR83OSQ9Y284 106 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 TRAV17A0A0B4J275 112 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 PRSS1P07477 247 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 RELBQ01201 579 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 RNF7Q9UBF6 113 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 ICE1Q9Y2F5 2266 aa12.34□□□□□ -0.43
VPS36-207ENST00000611132 PGPA6NDG6 321 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 E9PLN8 166 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 CA2P00918 260 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 MMDQ15546 238 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 TMEM42Q69YG0 159 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 WDR31Q8NA23 367 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 DNASE2BQ8WZ79 361 aa12.33□□□□□ -0.44
VPS36-207ENST00000611132 LIME1Q9H400 295 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms