RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 GSTT2P0CG29 244 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 GSTT2BP0CG30 244 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 PSMB6P28072 239 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 ELLP55199 621 aaPredicted RBP9.39□□□□□ -0.91
VPS29-211ENST00000553128 KLK9Q2XQG4 91 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 POM121L12Q8N7R1 296 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 Q8NAQ8 132 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 PYDC1Q8WXC3 89 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 MAFIPQ8WZ33 124 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 TMEM190Q8WZ59 177 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 ARHGAP5-AS1Q96IT6 56 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 ZNF436Q9C0F3 470 aaPredicted RBP9.39□□□□□ -0.91
VPS29-211ENST00000553128 KLK9Q9UKQ9 250 aa9.39□□□□□ -0.91
VPS29-211ENST00000553128 DIMT1Q9UNQ2 313 aaKnown RBP9.39□□□□□ -0.91
VPS29-211ENST00000553128 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 LOC100130705A0A1B0GUX0 176 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 OR4C46A6NHA9 309 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 FABP7O15540 132 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 ZNF207O43670 478 aaKnown RBP9.38□□□□□ -0.91
VPS29-211ENST00000553128 FCGR3BO75015 233 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 CA1P00915 261 aaPredicted RBP9.38□□□□□ -0.91
VPS29-211ENST00000553128 RBMY1A1P0DJD3 496 aaKnown RBP9.38□□□□□ -0.91
VPS29-211ENST00000553128 RBMY1CP0DJD4 496 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 RPL27AP46776 148 aaKnown RBP9.38□□□□□ -0.91
VPS29-211ENST00000553128 RBMY1FQ15415 496 aaKnown RBP9.38□□□□□ -0.91
VPS29-211ENST00000553128 OR2B11Q5JQS5 317 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 PLAC9Q5JTB6 97 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 OR4A4PQ8NGN8 299 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 ZNF502Q8TBZ5 544 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 CMSS1Q9BQ75 279 aaKnown RBP9.38□□□□□ -0.91
VPS29-211ENST00000553128 DCUN1D5Q9BTE7 237 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 CABLES2Q9BTV7 478 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 CHRDL1Q9BU40 450 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 PECRQ9BY49 303 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 HSF4Q9ULV5 492 aa9.38□□□□□ -0.91
VPS29-211ENST00000553128 CGB1A6NKQ9 187 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 RAB27BO00194 218 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 CREBL2O60519 120 aaPredicted RBP9.37□□□□□ -0.91
VPS29-211ENST00000553128 MYL12AP19105 171 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 CELP19835 753 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 SERPINB10P48595 397 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 RPL30P62888 115 aaKnown RBP9.37□□□□□ -0.91
VPS29-211ENST00000553128 TPBGQ13641 420 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 P2RY14Q15391 338 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 PVRIGQ6DKI7 326 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 LAMTOR1Q6IAA8 161 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 PLET1Q6UQ28 207 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 SSX9Q7RTT3 188 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 OR10J5Q8NHC4 309 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 ADTRPQ96IZ2 230 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 OR51E2Q9H255 320 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 HRH4Q9H3N8 390 aa9.37□□□□□ -0.91
VPS29-211ENST00000553128 RBM7Q9Y580 266 aaKnown RBP9.37□□□□□ -0.91
VPS29-211ENST00000553128 IGHV4-28A0A0C4DH34 117 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 J3QRK9 145 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 KBTBD11O94819 623 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 ADMP35318 185 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 TFPI2P48307 235 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 C6orf62Q9GZU0 229 aaPredicted RBP9.36□□□□□ -0.91
VPS29-211ENST00000553128 DAZ1Q9NQZ3 744 aaKnown RBP9.36□□□□□ -0.91
VPS29-211ENST00000553128 KCNK7Q9Y2U2 307 aa9.36□□□□□ -0.91
VPS29-211ENST00000553128 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 ELOA3CA0A087WX78 387 aaPredicted RBP9.35□□□□□ -0.91
VPS29-211ENST00000553128 TRAV10A0A0B4J240 114 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 OR2T8A6NH00 312 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 TGOLN2O43493 480 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 BPNT1O95861 308 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 DEFA4P12838 97 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 HIST1H1BP16401 226 aaKnown RBP9.35□□□□□ -0.91
VPS29-211ENST00000553128 PSMD7P51665 324 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 PLA2G7Q13093 441 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 TMEM187Q14656 261 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 RBM48Q5RL73 367 aaKnown RBP9.35□□□□□ -0.91
VPS29-211ENST00000553128 ZNF767PQ75MW2 155 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 PUSL1Q8N0Z8 303 aaKnown RBP9.35□□□□□ -0.91
VPS29-211ENST00000553128 TMEM167AQ8TBQ9 72 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 ZNF414Q96IQ9 312 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 CXorf58Q96LI9 332 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 OR2A7Q96R45 310 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 RNF2Q99496 336 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 GFI1Q99684 422 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 RNF126Q9BV68 326 aa9.35□□□□□ -0.91
VPS29-211ENST00000553128 CDK2AP2O75956 126 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 DHFRP00374 187 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 FCGR3AP08637 254 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 CD37P11049 281 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 ACSM3Q53FZ2 586 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 Q6ZR54 194 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 NR2C2APQ86WQ0 139 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 TMEM80Q96HE8 168 aa9.34□□□□□ -0.91
VPS29-211ENST00000553128 URM1Q9BTM9 101 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms