RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 LINC01548A6NM66 108 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 H0Y980 276 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 H7C2Y5 167 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 FCN1O00602 326 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 ARPC1BO15143 372 aaKnown RBP8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 B3GALNT1O75752 331 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 MPC2O95563 127 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 APOA2P02652 100 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 H2AFB2P0C5Z0 115 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 OR5AC1P0C628 307 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 NUP62P37198 522 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 ARHGDIBP52566 201 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 HES1Q14469 280 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 PSG5Q15238 335 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 POU2AF1Q16633 256 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 ABCA11PQ4W5N1 156 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 DHRS7BQ6IAN0 325 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 RBMS3Q6XE24 437 aaKnown RBP8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 TMED4Q7Z7H5 227 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 PUSL1Q8N0Z8 303 aaKnown RBP8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 RNF5Q99942 180 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 NUDT15Q9NV35 164 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 C1RLQ9NZP8 487 aa8.47□□□□□ -1.05
NPIPB3-210ENST00000542817 VWFP04275 2813 aa8.46□□□□□ -1.05
NPIPB3-210ENST00000542817 TRAV6A0A075B6T7 132 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TRAV3A0A0B4J244 114 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 A0A0G2JRQ6 117 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 HMSDA8MTL9 139 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 MPTX1A8MV57 137 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 SMLR1H3BR10 107 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 RRHO14718 337 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 NBR2O15453 112 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 OR2A4O95047 310 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 CDS2O95674 445 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 IGKV1-5P01602 117 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 IL5P05113 134 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 FGF2P09038 288 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 AKR1C4P17516 323 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 KIR2DS2P43631 304 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 LPAR6P43657 344 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 NDPQ00604 133 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 PJVKQ0ZLH3 352 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 CATR1Q13166 79 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 OPCMLQ14982 345 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 RTL8BQ17RB0 113 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 C5orf64Q2M2E5 130 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 ANKRD55Q3KP44 614 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 Q8N2B8 174 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 STPG2Q8N412 459 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TCTEX1D1Q8N7M0 179 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 OR4S2Q8NH73 311 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 OSR1Q8TAX0 266 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 SEC22AQ96IW7 307 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 HARBI1Q96MB7 349 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 OR2A7Q96R45 310 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 ALX4Q9H161 411 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 FBXL15Q9H469 300 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 ZNF702PQ9H963 129 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 PLEKHA2Q9HB19 425 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 LIN7CQ9NUP9 197 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 C14orf166Q9Y224 244 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 MOB4Q9Y3A3 225 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 PRELID3BQ9Y3B1 194 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
NPIPB3-210ENST00000542817 TEX13DA0A0J9YY54 714 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 A0A1B0GW64 132 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 C9orf170A2RU37 121 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 RNF212BA8MTL3 300 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 SNRPGP15A8MWD9 76 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 FGF16O43320 207 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 TSC22D2O75157 780 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 SFT2D2O95562 160 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 HPRT1P00492 218 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 GIPP09681 153 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 SAA1P0DJI8 122 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 EGR2P11161 476 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 LGALS7P47929 136 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 TAS2R31P59538 309 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 UBE2MP61081 183 aaKnown RBP8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 UBE2KP61086 200 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 RAP2BP61225 183 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 RPS16P62249 146 aaKnown RBP8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 DHRS2Q13268 280 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 MMDQ15546 238 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 Q6ZSV7 163 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 C16orf82Q7Z2V1 217 aa8.45□□□□□ -1.06
NPIPB3-210ENST00000542817 SELENOHQ8IZQ5 122 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms