RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 HTD2P86397 168 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 ZNF726P1Q15940 193 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 HIST3H3Q16695 136 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 PLPPR5Q32ZL2 321 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 ACSF3Q4G176 576 aaPredicted RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 SPINK9Q5DT21 86 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 NUFIP2Q7Z417 695 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 MRPL52Q86TS9 123 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 NUDT10Q8NFP7 164 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 PLPPR1Q8TBJ4 325 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 DPF1Q92782 380 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 GALMQ96C23 342 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 RPUSD4Q96CM3 377 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 ANAPC16Q96DE5 110 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 PSMG3Q9BT73 122 aaPredicted RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 TTTY12Q9BZ98 90 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 PLSCR2Q9NRY7 297 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CLEC5AQ9NY25 188 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 NAGKQ9UJ70 344 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 NCOA6Q14686 2063 aaPredicted RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 ATMQ13315 3056 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 IGKV1-27A0A075B6S5 117 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 OR7C2O60412 319 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 FRMD6-AS1P0C7T7 363 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 COX6B1P14854 86 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 OR10J1P30954 320 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 CNN1P51911 297 aaKnown RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 PAX9P55771 341 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 ENDOGQ14249 297 aaKnown RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 SNAI3Q3KNW1 292 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 TMEM41BQ5BJD5 291 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 ZNF818PQ6ZRF7 136 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 GAPTQ8N292 157 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 OR2T10Q8NGZ9 312 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 ABHD17AQ96GS6 310 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 PKD1L2Q7Z442 2459 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 IGLV3-12A0A075B6K2 115 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 IGHV3OR15-7A0A075B7D8 119 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 LRRC3CA6NJW4 275 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 FCGR3BO75015 233 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 CDC34P49427 236 aaPredicted RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 SERF2P84101 59 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 MEF2BQ02080 365 aaPredicted RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 RTL8BQ17RB0 113 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 SLC25A53Q5H9E4 307 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 KCNIP4Q6PIL6 250 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 BHLHA15Q7RTS1 189 aaPredicted RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 LINC01560Q8TB33 94 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 LHX4Q969G2 390 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 SLC35E1Q96K37 410 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 RAB40CQ96S21 281 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 FAM103A1Q9BTL3 118 aaKnown RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 TMUB1Q9BVT8 246 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 OR6C3Q9NZP0 311 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 ZFP30Q9Y2G7 519 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 IGKV1-12A0A0C4DH73 117 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 ODAMA1E959 279 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 LILRA1O75019 489 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 SAP30O75446 220 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 DKK1O94907 266 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 IGKV1D-12P01611 117 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 OTX1P32242 354 aaPredicted RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 REG1BP48304 166 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 FUT6P51993 359 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 ASCL4Q6XD76 172 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 FAM58AQ8N1B3 248 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 NFAM1Q8NET5 270 aaPredicted RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 OR5D13Q8NGL4 314 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 LOXL4Q96JB6 756 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 CIB3Q96Q77 187 aaPredicted RBP4.43□□□□□ -1.7
PROM1-220ENST00000540805 IL36GQ9NZH8 169 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 CLN8Q9UBY8 286 aa4.43□□□□□ -1.7
PROM1-220ENST00000540805 IGHV3OR16-10A0A075B7F0 116 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 H0Y8G0 127 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 H0Y980 276 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 TYMSP04818 313 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 EGR1P18146 543 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 PSMB3P49720 205 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 RBM11P57052 281 aaKnown RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 HIST1H3AP68431 136 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 ERHP84090 104 aaKnown RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 TCF15Q12870 199 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 C10orf128Q5T292 105 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 Q6ZPA2 131 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 Q6ZWC4 215 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 CENPVQ7Z7K6 275 aaPredicted RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 ZNF525Q8N782 197 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 SLC25A40Q8TBP6 338 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 NUDT11Q96G61 164 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 IMMP2LQ96T52 175 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 TMEM204Q9BSN7 226 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 PARLQ9H300 379 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 GAL3ST2Q9H3Q3 398 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
PROM1-220ENST00000540805 MALRD1Q5VYJ5 2156 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 TMEM250H0YL14 139 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 GYPAP02724 150 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 RBP4P02753 201 aa4.42□□□□□ -1.7
PROM1-220ENST00000540805 UMODP07911 640 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms