RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ANXA10Q9UJ72 324 aa7.44□□□□□ -1.22
TMEM39A-210ENST00000490099 A8MZ25 164 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 CTDSP2O14595 271 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 HPGDSO60760 199 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 SAP30O75446 220 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 TPPPO94811 219 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 OR9G9P0C7N8 305 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 GP9P14770 177 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 NFYAP23511 347 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 PTBP1P26599 531 aaKnown RBP eCLIP7.43□□□□□ -1.226e-11■■■■■ 31.5
TMEM39A-210ENST00000490099 CBX3Q13185 183 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 CDK10Q15131 360 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 VMA21Q3ZAQ7 101 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 LAX1Q8IWV1 398 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 TTC9CQ8N5M4 171 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 NUDCD2Q8WVJ2 157 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 DIRAS2Q96HU8 199 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 HSD17B10Q99714 261 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 WDR12Q9GZL7 423 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 ZNF430Q9H8G1 570 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 RBM7Q9Y580 266 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 DMRT1Q9Y5R6 373 aa7.43□□□□□ -1.22
TMEM39A-210ENST00000490099 C13orf42A0A1B0GVH6 325 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 EIF4EP06730 217 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 SAA1P0DJI8 122 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 ELK1P19419 428 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 TNFSF8P32971 234 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 ETV6P41212 452 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 GNG2P59768 71 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 ZNF45Q02386 682 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 ZNF66Q6ZN08 573 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 IDO2Q6ZQW0 420 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 HOGA1Q86XE5 327 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 SBSPONQ8IVN8 264 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 MMD2Q8IY49 270 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 PUSL1Q8N0Z8 303 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 OR9G4Q8NGQ1 327 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 TMEM167AQ8TBQ9 72 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 SPIN2AQ99865 258 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 SPIN2BQ9BPZ2 258 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 THAP7Q9BT49 309 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 MIXL1Q9H2W2 232 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 AUNIPQ9H7T9 357 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 EXTL2Q9UBQ6 330 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 PEF1Q9UBV8 284 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 PRELID3BQ9Y3B1 194 aa7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 KMT2CQ8NEZ4 4911 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-210ENST00000490099 TRAV18A0A075B6X5 111 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 A0A1B0GW64 132 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 FABP12A6NFH5 140 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 FAM223BA6NKX1 122 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 TEX22C9J3V5 150 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 RBFOX2O43251 390 aaKnown RBP eCLIP7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 XRCC3O43542 346 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 CREBL2O60519 120 aaPredicted RBP7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 FCGR3BO75015 233 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 TRBV12-3P01733 135 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 CSN3P07498 182 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 MRPS10P82664 201 aaKnown RBP7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 ZNF846Q147U1 533 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 POU2AF1Q16633 256 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 TMEM69Q5SWH9 247 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 KCTD9Q7L273 389 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 CCDC190Q86UF4 302 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 FAM223AQ8IWN6 122 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 MFSD4AQ8N468 514 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 NECAP1Q8NC96 275 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 ZBTB34Q8NCN2 500 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 BEST4Q8NFU0 473 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 GIMAP1Q8WWP7 306 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 CITED4Q96RK1 184 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 ASCL2Q99929 193 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 ELOVL1Q9BW60 279 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 ZNF355PQ9NSJ1 428 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 ANAPC10Q9UM13 185 aa7.41□□□□□ -1.22
TMEM39A-210ENST00000490099 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 E7EUB6 86 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 J3QRK9 145 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 OR2A4O95047 310 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 CRYGCP07315 174 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 FGF2P09038 288 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 FRMD6-AS1P0C7T7 363 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 ZNF735P0CB33 412 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 FCGR2CP31995 323 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 MAS1LP35410 378 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 RHOGP84095 191 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 IL18Q14116 193 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 TNXAQ16473 311 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 C10orf55Q5SWW7 151 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 DHRS11Q6UWP2 260 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 ADAMTSL5Q6ZMM2 481 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 CADM3Q8N126 398 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 GVQW1Q8N7I0 195 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 OR4S2Q8NH73 311 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 VSTM2AQ8TAG5 236 aa7.4□□□□□ -1.22
TMEM39A-210ENST00000490099 SNAPC3Q92966 411 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms