RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.44□□□□□ -1.38
SND1-206ENST00000468166 CR1P17927 2039 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 MED13LQ71F56 2210 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 A0A096LNT2 108 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 TRAV3A0A0B4J244 114 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 TRAV20A0A0B4J274 112 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 FAM24AA6NFZ4 105 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 SRRM4A7MD48 611 aaKnown RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 CEBPZOSA8MTT3 80 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 RNF223E7ERA6 249 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 H3BP45 60 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 UPK2O00526 184 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 RGS13O14921 159 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 TIMM23O14925 209 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 NPFFO15130 113 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 KBTBD11O94819 623 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 GATA3P23771 443 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 TAS2R30P59541 319 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 SPCS3P61009 180 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 UBA52P62987 128 aaKnown RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 RELBQ01201 579 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 EWSR1Q01844 656 aaKnown RBP eCLIP6.44□□□□□ -1.38
SND1-206ENST00000468166 LOXL1Q08397 574 aaPredicted RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 VMA21Q3ZAQ7 101 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 AARDQ4LEZ3 155 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 LDLRAD2Q5SZI1 272 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 PRSS57Q6UWY2 283 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 SLC51BQ86UW2 128 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 ZNF429Q86V71 674 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 STX12Q86Y82 276 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 LINC01356Q8N9X3 169 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 OR8H1Q8NGG4 311 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 OR4A5Q8NH83 315 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 DTD1Q8TEA8 209 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 RBMXL1Q96E39 390 aaKnown RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 C1orf159Q96HA4 380 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 SMIM8Q96KF7 97 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 CIB3Q96Q77 187 aaPredicted RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 TSNAXQ99598 290 aaKnown RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 ZNF471Q9BX82 626 aaPredicted RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 TMEM14BQ9NUH8 114 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 PSENENQ9NZ42 101 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 FBXL17Q9UF56 701 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 FOXA2Q9Y261 457 aaPredicted RBP6.44□□□□□ -1.38
SND1-206ENST00000468166 AUP1Q9Y679 476 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 CSMD2Q7Z408 3487 aa6.44□□□□□ -1.38
SND1-206ENST00000468166 TRAV40A0A0B4J280 105 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 IGSF23A1L1A6 192 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 TAAR5O14804 337 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 SLC25A17O43808 307 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 VENTXO95231 258 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 SPDEFO95238 335 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 LY86O95711 162 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 TMEM50AO95807 157 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 IFNA7P01567 189 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 FGF2P09038 288 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 CD1BP29016 333 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 SAA4P35542 130 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 LGALS7P47929 136 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 HOXA1P49639 335 aaPredicted RBP6.43□□□□□ -1.38
SND1-206ENST00000468166 PAX9P55771 341 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 BAXQ07812 192 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 TMEM267Q0VDI3 215 aaPredicted RBP6.43□□□□□ -1.38
SND1-206ENST00000468166 SSX2Q16385 188 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 SPINK9Q5DT21 86 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 ZNF767PQ75MW2 155 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 PUSL1Q8N0Z8 303 aaKnown RBP6.43□□□□□ -1.38
SND1-206ENST00000468166 TMEM252Q8N6L7 170 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 OR52E5Q8NH55 327 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 TMEM167AQ8TBQ9 72 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 CFHR4Q92496 578 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 Q96MF0 132 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 REG4Q9BYZ8 158 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 SMIM3Q9BZL3 60 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 C7orf69Q9H7B7 122 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 ENY2Q9NPA8 101 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 HIF1ANQ9NWT6 349 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 FKBP11Q9NYL4 201 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 ZNF257Q9Y2Q1 563 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 OR51B2Q9Y5P1 312 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 U3KQ87 197 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 ASH1LQ9NR48 2969 aaKnown RBP6.43□□□□□ -1.38
SND1-206ENST00000468166 UNC79Q9P2D8 2635 aa6.43□□□□□ -1.38
SND1-206ENST00000468166 IGHV1-69DA0A0B4J2H0 117 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 CENPVL3A0A0U1RRI6 287 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 CST7O76096 145 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 IGKV1D-33P01593 117 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 IGKV1-33P01594 117 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 IGLV2-23P01705 113 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 IGHV1-69P01742 117 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 IL6RP08887 468 aaPredicted RBP6.42□□□□□ -1.38
SND1-206ENST00000468166 TPT1P13693 172 aaKnown RBP6.42□□□□□ -1.38
SND1-206ENST00000468166 SULT1A1P50225 295 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 HSPE1P61604 102 aaKnown RBP6.42□□□□□ -1.38
SND1-206ENST00000468166 RPL8P62917 257 aaKnown RBP6.42□□□□□ -1.38
SND1-206ENST00000468166 EIF5AP63241 154 aaKnown RBP6.42□□□□□ -1.38
SND1-206ENST00000468166 NHLH2Q02577 135 aa6.42□□□□□ -1.38
SND1-206ENST00000468166 EXOSC2Q13868 293 aaKnown RBP6.42□□□□□ -1.38
SND1-206ENST00000468166 HES1Q14469 280 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms