RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IGLL5B9A064 214 aa12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 RTL8CO15255 209 aa12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 CREBL2O60519 120 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 ZNF124Q15973 351 aa12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 ACSM3Q53FZ2 586 aa12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 OR10J5Q8NHC4 309 aa12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 PHYHIPQ92561 330 aa12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-209ENST00000454428 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 DEFB4AO15263 64 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 MFAP2P55001 183 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 RPL30P62888 115 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 ST3GAL4Q11206 333 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 MED21Q13503 144 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 P2RY14Q15391 338 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 RBM48Q5RL73 367 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 APRG1Q8IVJ8 170 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 OR6M1Q8NGM8 313 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 C9orf16Q9BUW7 83 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 OR51E2Q9H255 320 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 UFC1Q9Y3C8 167 aa12.57□□□□□ -0.4
UBE2D4-209ENST00000454428 TRBV7-1A0A0A6YYK4 115 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 CGB1A6NKQ9 187 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 FCGR3BO75015 233 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 FCGR3AP08637 254 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 MYOD1P15172 320 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 GPR183P32249 361 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 RPL27AP46776 148 aaKnown RBP12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 PUSL1Q8N0Z8 303 aaKnown RBP12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 ZNF502Q8TBZ5 544 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 MAFIPQ8WZ33 124 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
UBE2D4-209ENST00000454428 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 CIB2O75838 187 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 KBTBD11O94819 623 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 DIRAS3O95661 229 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 REG1AP05451 166 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 PLA2G7Q13093 441 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 TMEM190Q8WZ59 177 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 DNAH5Q8TE73 4624 aa12.55□□□□□ -0.4
UBE2D4-209ENST00000454428 MPTX1A8MV57 137 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 IGLV2-14P01704 120 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 CDK1P06493 297 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 WNT4P56705 351 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 BRWD1-AS2P59051 145 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 MED22Q15528 200 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 OR2B11Q5JQS5 317 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 H1FOOQ8IZA3 346 aaPredicted RBP12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 TMEM167AQ8TBQ9 72 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 DCUN1D5Q9BTE7 237 aa12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 RBM7Q9Y580 266 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-209ENST00000454428 IGKV1D-8A0A087WSZ0 117 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 OR4C46A6NHA9 309 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 RPA2P15927 270 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 RASSF2P50749 326 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 LAIR2Q6ISS4 152 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 ZFP1Q6P2D0 407 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 CXorf58Q96LI9 332 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 OR2A7Q96R45 310 aa12.53□□□□□ -0.4
UBE2D4-209ENST00000454428 SLC17A2O00624 439 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 LAMTOR1Q6IAA8 161 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 PLET1Q6UQ28 207 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 NANOGP1Q8N7R0 232 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 ZNF555Q8NEP9 628 aa12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
UBE2D4-209ENST00000454428 TGOLN2O43493 480 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 DHFRP00374 187 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 CTSDP07339 412 aaPredicted RBP12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 UCHL1P09936 223 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 MAS1LP35410 378 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 CLDN12P56749 244 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 EIF4EBP1Q13541 118 aaPredicted RBP12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 IRF3Q14653 427 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 SSX9Q7RTT3 188 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 MS4A15Q8N5U1 240 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 ZNF645Q8N7E2 425 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 Q8NAQ8 132 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 OR56B1Q8NGI3 324 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 SMPD3Q9NY59 655 aaPredicted RBP12.51□□□□□ -0.41
UBE2D4-209ENST00000454428 C11orf94C9JXX5 98 aa12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 J3QRK9 145 aa12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 PTBP1P26599 531 aaKnown RBP eCLIP12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 ADMP35318 185 aa12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 PSMD7P51665 324 aa12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 PLGRKTQ9HBL7 147 aa12.5□□□□□ -0.41
UBE2D4-209ENST00000454428 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms