RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 ABHD3Q8WU67 409 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 PRDM14Q9GZV8 571 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 C15orf62A8K5M9 175 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 ZNF891A8MT65 544 aaPredicted RBP13.38□□□□□ -0.27
CNOT3-204ENST00000447684 FOXH1O75593 365 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 MT-ND6P03923 174 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 RAC3P60763 192 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 C19orf35Q6ZS72 473 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 ZNF439Q8NDP4 499 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 BCL2L2Q92843 193 aaPredicted RBP13.38□□□□□ -0.27
CNOT3-204ENST00000447684 RAB1CQ92928 201 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
CNOT3-204ENST00000447684 TRAV9-2A0A087WT02 112 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 M0R2Z0 102 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 ACTL6BO94805 426 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 CA1P00915 261 aaPredicted RBP13.37□□□□□ -0.27
CNOT3-204ENST00000447684 GCHFRP30047 84 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 PMCHL1Q16048 86 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 SYT13Q7L8C5 426 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 CLCF1Q9UBD9 225 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 OR2T8A6NH00 312 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 APCSP02743 223 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 CX3CL1P78423 397 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 VWC2Q2TAL6 325 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 RNASEKQ6P5S7 137 aaKnown RBP13.37□□□□□ -0.27
CNOT3-204ENST00000447684 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 SEPSECSQ9HD40 501 aaKnown RBP13.37□□□□□ -0.27
CNOT3-204ENST00000447684 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 CDC42EP3Q9UKI2 254 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 FREM2Q5SZK8 3169 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 OR5B21A6NL26 309 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 NEURL1O76050 574 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 TMEM11P17152 192 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 EN2P19622 333 aaPredicted RBP13.37□□□□□ -0.27
CNOT3-204ENST00000447684 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 OR52L2PQ8NGH6 319 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 OR4P4Q8NGL7 312 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 TXNDC17Q9BRA2 123 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 SF3B5Q9BWJ5 86 aaKnown RBP13.37□□□□□ -0.27
CNOT3-204ENST00000447684 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
CNOT3-204ENST00000447684 ANKRD30BLA7E2S9 258 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 OR2H2O95918 312 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 CRYBB3P26998 211 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 CATR1Q13166 79 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 TNXAQ16473 311 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 ZNF718Q3SXZ3 478 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 AMMECR1LQ6DCA0 310 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 MS4A5Q9H3V2 200 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 HEYLQ9NQ87 328 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-204ENST00000447684 SAA2-SAA4A0A096LPE2 208 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 HELTA6NFD8 242 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 ZNF716A6NP11 495 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 CGAP01215 116 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 COL6A3P12111 3177 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
CNOT3-204ENST00000447684 SPATA46Q5T0L3 261 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 PRR27Q6MZM9 219 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 TREML4Q6UXN2 200 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 MUC15Q8N387 334 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 ZNF645Q8N7E2 425 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 SLC24A4Q8NFF2 622 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 CORO2AQ92828 525 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 MGST2Q99735 147 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 PRRG4Q9BZD6 226 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 ARL2-SNX15V9GYD0 113 aa13.36□□□□□ -0.27
CNOT3-204ENST00000447684 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 NUDT3O95989 172 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 CEBPDP49716 269 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-204ENST00000447684 C5orf30Q96GV9 206 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 FAM234AQ9H0X4 552 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 CHODLQ9H9P2 273 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 GJE1A6NN92 205 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 AMY1AP04745 511 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 RIPPLY3P57055 190 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 EBLN2Q6P2I7 272 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 PNKDQ8N490 385 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 NHLRC2Q8NBF2 726 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 OR10D3Q8NH80 312 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 NUDT11Q96G61 164 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 PLPPR2Q96GM1 343 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 GGTLC1Q9BX51 225 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 CSTL1Q9H114 145 aa13.35□□□□□ -0.27
CNOT3-204ENST00000447684 GNG3P63215 75 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 SLAQ13239 276 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 MOB1BQ7L9L4 216 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 LINC00596Q86U02 117 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 NEUROG1Q92886 237 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 ZC2HC1AQ96GY0 325 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 SSBP3Q9BWW4 388 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-204ENST00000447684 ZNF331Q9NQX6 463 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-204ENST00000447684 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 FAM181BA6NEQ2 426 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 DEFB108AA8MXU0 73 aa13.34□□□□□ -0.27
CNOT3-204ENST00000447684 HLA-DQA1P01909 254 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms