RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TRGC2P03986 189 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 OPRK1P41145 380 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 RPL23P62829 140 aaKnown RBP13.86□□□□□ -0.19
NUP50-203ENST00000407019 BSXQ3C1V8 233 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 TMEM30BQ3MIR4 351 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 ABHD12Q8N2K0 398 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 RAB1CQ92928 201 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 RHOVQ96L33 236 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 MS4A5Q9H3V2 200 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 DOK5Q9P104 306 aa13.86□□□□□ -0.19
NUP50-203ENST00000407019 FOXA2Q9Y261 457 aaPredicted RBP13.86□□□□□ -0.19
NUP50-203ENST00000407019 ASPMQ8IZT6 3477 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 TRAV38-1A0A0B4J264 116 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 A0A1W2PPV4 95 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 GNG10P50151 68 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 TMEM249Q2WGJ8 235 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 GCSAMLQ5JQS6 135 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 TEX36Q5VZQ5 186 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 OR4A47Q6IF82 309 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 TMEM170AQ8WVE7 144 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 LINC00574Q9H8X3 128 aa13.85□□□□□ -0.19
NUP50-203ENST00000407019 A0A0G2JNJ9 132 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 PRRG2O14669 202 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BKO60814 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 YIF1AO95070 293 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BJP06899 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BOP23527 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BBP33778 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BDP58876 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BCP62807 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST2H2BEQ16778 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.84□□□□□ -0.19
NUP50-203ENST00000407019 C16orf82Q7Z2V1 217 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 CORO2AQ92828 525 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BHQ93079 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 MGST2Q99735 147 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BNQ99877 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 HIST1H2BMQ99879 126 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 Q9UFV3 132 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 DSPP15924 2871 aaKnown RBP13.84□□□□□ -0.19
NUP50-203ENST00000407019 DMXL1Q9Y485 3027 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 CNOT1A5YKK6 2376 aaKnown RBP13.84□□□□□ -0.19
NUP50-203ENST00000407019 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 CDX1P47902 265 aaPredicted RBP13.84□□□□□ -0.19
NUP50-203ENST00000407019 HSPE1P61604 102 aaKnown RBP13.84□□□□□ -0.19
NUP50-203ENST00000407019 DOLPP1Q86YN1 238 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 ENY2Q9NPA8 101 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 TMEM14BQ9NUH8 114 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 PXMP4Q9Y6I8 212 aa13.84□□□□□ -0.19
NUP50-203ENST00000407019 RAI1Q7Z5J4 1906 aaPredicted RBP13.83□□□□□ -0.19
NUP50-203ENST00000407019 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 C16orf97H3BN30 126 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 HRASP01112 189 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 WFDC8Q8IUA0 241 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 TGIF2LYQ8IUE0 185 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 SLC24A4Q8NFF2 622 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 KCNIP2Q9NS61 270 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 ELOVL5Q9NYP7 299 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 HCFC1P51610 2035 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 CADP27708 2225 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 DSCAMO60469 2012 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 TNFRSF1AP19438 455 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 NPY1RP25929 384 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 TDGF1P3P51864 188 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 POU2AF1Q16633 256 aa13.83□□□□□ -0.2
NUP50-203ENST00000407019 PATZ1Q9HBE1 687 aaKnown RBP13.83□□□□□ -0.2
NUP50-203ENST00000407019 RPUSD1Q9UJJ7 312 aaKnown RBP13.83□□□□□ -0.2
NUP50-203ENST00000407019 hADV38S2A0JD32 116 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 H7BYZ3 331 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 MMP23AO75900 390 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 CCL8P80075 99 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 SPNS3Q6ZMD2 512 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 SLC25A48Q6ZT89 311 aaKnown RBP13.82□□□□□ -0.2
NUP50-203ENST00000407019 ZCCHC14Q8WYQ9 949 aaKnown RBP13.82□□□□□ -0.2
NUP50-203ENST00000407019 NPVFQ9HCQ7 196 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 NIT2Q9NQR4 276 aa13.82□□□□□ -0.2
NUP50-203ENST00000407019 PDE6DO43924 150 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 MIC13Q5XKP0 118 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 ABHD17AQ96GS6 310 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 OR5B12Q96R08 314 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 LSM4Q9Y4Z0 139 aaKnown RBP13.81□□□□□ -0.2
NUP50-203ENST00000407019 LINC00312Q9Y6C7 94 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 DPRXA6NFQ7 191 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 TMPRSS2O15393 492 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 VENTXO95231 258 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 PFN1P07737 140 aaKnown RBP13.81□□□□□ -0.2
NUP50-203ENST00000407019 TRGC1P0CF51 173 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 NDUFB7P17568 137 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 S100PP25815 95 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 NBL1P41271 181 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 UBE2G2P60604 165 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 ADIPOQQ15848 244 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 FRZBQ92765 325 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 SNRNP40Q96DI7 357 aaKnown RBP13.81□□□□□ -0.2
NUP50-203ENST00000407019 PRNDQ9UKY0 176 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 TP53TG5Q9Y2B4 290 aa13.81□□□□□ -0.2
NUP50-203ENST00000407019 OR51B2Q9Y5P1 312 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms