RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 C2orf82Q6UX34 121 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 HOGA1Q86XE5 327 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 DEFB119Q8N690 84 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 OR2A7Q96R45 310 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 MTORP42345 2549 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 WNT9BO14905 357 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 HCRTO43612 131 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 WNT5AP41221 380 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 PITX1P78337 314 aaPredicted RBP5.35□□□□□ -1.55
VCAN-203ENST00000343200 HEPN1Q6WQI6 88 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 APCDD1LQ8NCL9 501 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 PPDPFLQ8WWR9 84 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 SSPNQ14714 243 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 METRNLQ641Q3 311 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 OLIG3Q7RTU3 272 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 NTN1O95631 604 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 TBR1Q16650 682 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 C16orf92Q96LL3 132 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 DNAJC30Q96LL9 226 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 IP6K3Q96PC2 410 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 SMPXQ9UHP9 88 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 EMDP50402 254 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 ZNF362Q5T0B9 420 aaPredicted RBP5.35□□□□□ -1.55
VCAN-203ENST00000343200 SMIM8Q96KF7 97 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 DIRC2Q96SL1 478 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 APOOQ9BUR5 198 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 KIR3DX1Q9H7L2 352 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 Q9Y3F1 56 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 A0A1W2PR48 441 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 IZUMO1RA6ND01 250 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 FXYD1O00168 92 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 EDN1P05305 212 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 SELLP14151 372 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 RPL31P62899 125 aaKnown RBP5.35□□□□□ -1.55
VCAN-203ENST00000343200 CD300EQ496F6 205 aaPredicted RBP5.35□□□□□ -1.55
VCAN-203ENST00000343200 TAF15Q92804 592 aaKnown RBP eCLIP5.35□□□□□ -1.55
VCAN-203ENST00000343200 NEUROG3Q9Y4Z2 214 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 GAGE12JA6NER3 117 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 MKRN2OSH3BPM6 223 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 J3KRW8 73 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 GAGE7O76087 117 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 GAGE12FP0CL80 117 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 GAGE12GP0CL81 117 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 GAGE12IP0CL82 117 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 GAGE4Q13068 117 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 C9orf50Q5SZB4 431 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 SPATA46Q5T0L3 261 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 RPS19BP1Q86WX3 136 aaKnown RBP5.35□□□□□ -1.55
VCAN-203ENST00000343200 RNASEH2CQ8TDP1 164 aaKnown RBP5.35□□□□□ -1.55
VCAN-203ENST00000343200 KCPQ6ZWJ8 1503 aa5.35□□□□□ -1.55
VCAN-203ENST00000343200 A8MWP6 167 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 RTL10Q7L3V2 364 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 ZNF645Q8N7E2 425 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 CSTL1Q9H114 145 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 H3BNC9 293 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 M0R1B8 84 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 IGHV3-9P01782 118 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 PPICP45877 212 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 YPEL5P62699 121 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 TNXAQ16473 311 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 KIAA1644Q3SXP7 199 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 SLC23A3Q6PIS1 610 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 C4orf45Q96LM5 186 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 TMUB1Q9BVT8 246 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 GPR132Q9UNW8 380 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 CA11O75493 328 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 GJB3O75712 270 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 ZP1P60852 638 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 RUNX1Q01196 453 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 ALKBH6Q3KRA9 238 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 FAM90A2PQ658T7 463 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 SLC25A10Q9UBX3 287 aaPredicted RBP5.34□□□□□ -1.55
VCAN-203ENST00000343200 SERGEFQ9UGK8 458 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 SLC45A1Q9Y2W3 748 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 PLPP3O14495 311 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 MRPL43Q8N983 215 aaKnown RBP5.34□□□□□ -1.55
VCAN-203ENST00000343200 C16orf52Q8NHV5 167 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 VWC2LB2RUY7 222 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 VSIG10L2P0DP72 767 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 GAGE5Q13069 117 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 GAGE6Q13070 117 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 COQ2Q96H96 371 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 ERG28Q9UKR5 140 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 DAPP1Q9UN19 280 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 SHANK3Q9BYB0 1731 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 A0A1W2PR80 420 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 M0QZQ0 153 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 KLK8O60259 260 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 HBDP02042 147 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 DMKNQ6E0U4 476 aaPredicted RBP5.34□□□□□ -1.55
VCAN-203ENST00000343200 MORN4Q8NDC4 146 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 GPR146Q96CH1 333 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 NABP2Q9BQ15 211 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 PRR13Q9NZ81 148 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 SS18L2Q9UHA2 77 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 KLK13Q9UKR3 277 aa5.34□□□□□ -1.55
VCAN-203ENST00000343200 DNAJC25-GNG10A0A024R161 153 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms