RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CRYGCP07315 174 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
HDDC3-201ENST00000330334 ZNF735P0CB33 412 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 MECP2P51608 486 aaKnown RBP13.52□□□□□ -0.25
HDDC3-201ENST00000330334 C10orf55Q5SWW7 151 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 OR5AP2Q8NGF4 316 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 SECTM1Q8WVN6 248 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 C19orf73Q9NVV2 129 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 PEMTQ9UBM1 199 aa13.52□□□□□ -0.25
HDDC3-201ENST00000330334 C3orf84H3BNL1 204 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 BMPR1BO00238 502 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 PRH1P02810 166 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 FGF2P09038 288 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 IGHV4-30-4P0DP06 118 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 RPL27AP46776 148 aaKnown RBP13.51□□□□□ -0.25
HDDC3-201ENST00000330334 DEFA5Q01523 94 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 OR2K2Q8NGT1 345 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 KCTD12Q96CX2 325 aaKnown RBP13.51□□□□□ -0.25
HDDC3-201ENST00000330334 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
HDDC3-201ENST00000330334 A0A087WXM4 84 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 PTHLHP12272 177 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 RPS19P39019 145 aaKnown RBP13.5□□□□□ -0.25
HDDC3-201ENST00000330334 RPL8P62917 257 aaKnown RBP13.5□□□□□ -0.25
HDDC3-201ENST00000330334 EXOSC2Q13868 293 aaKnown RBP13.5□□□□□ -0.25
HDDC3-201ENST00000330334 POU2AF1Q16633 256 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 C15orf32Q32M92 178 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 LCN12Q6JVE5 192 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 HAPLN4Q86UW8 402 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 SGPP2Q8IWX5 399 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 Q8N402 240 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 CD300LFQ8TDQ1 290 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 BORCS5Q969J3 196 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 YIPF6Q96EC8 236 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 THAP7Q9BT49 309 aaPredicted RBP13.5□□□□□ -0.25
HDDC3-201ENST00000330334 SLC5A7Q9GZV3 580 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 ZMAT4Q9H898 229 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 VCX3AQ9NNX9 186 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 ADAM30Q9UKF2 790 aa13.5□□□□□ -0.25
HDDC3-201ENST00000330334 A0A1B0GW64 132 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 HMX3A6NHT5 357 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 E7EUB6 86 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 DHFRP00374 187 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 HPRT1P00492 218 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 TAS2R31P59538 309 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 CATR1Q13166 79 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 UBE2NLQ5JXB2 153 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 SPAG16Q8N0X2 631 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 TSPAN14Q8NG11 270 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 GPHA2Q96T91 129 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 TM2D3Q9BRN9 247 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 ANAPC10Q9UM13 185 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 DMRT1Q9Y5R6 373 aa13.49□□□□□ -0.25
HDDC3-201ENST00000330334 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 TNFSF12O43508 249 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 OR2J3O76001 311 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 TNFAIP8O95379 198 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 HIST1H1BP16401 226 aaKnown RBP13.48□□□□□ -0.25
HDDC3-201ENST00000330334 CTRB1P17538 263 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 HLA-GP17693 338 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 PSMB6P28072 239 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 CTRB2Q6GPI1 263 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 OR4A47Q6IF82 309 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 FANCD2OSQ96PS1 177 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 FYTTD1Q96QD9 318 aaKnown RBP13.48□□□□□ -0.25
HDDC3-201ENST00000330334 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
HDDC3-201ENST00000330334 PLEKHA2Q9HB19 425 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 FBXL7Q9UJT9 491 aa13.48□□□□□ -0.25
HDDC3-201ENST00000330334 LGALS9O00182 355 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 SULT1C2O00338 296 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 GGCTO75223 188 aaKnown RBP13.47□□□□□ -0.25
HDDC3-201ENST00000330334 NQO2P16083 231 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 NAT1P18440 290 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 GNRHRP30968 328 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 ZNF818PQ6ZRF7 136 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 SSX9Q7RTT3 188 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 CADM3Q8N126 398 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 IFT46Q9NQC8 304 aa13.47□□□□□ -0.25
HDDC3-201ENST00000330334 AREGP15514 252 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 TGFBR1P36897 503 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 FXYD4P59646 89 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 TMEM69Q5SWH9 247 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 GTSCR1Q86UQ5 136 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 LAX1Q8IWV1 398 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 SAMD12Q8N8I0 201 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 SLC25A46Q96AG3 418 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 CMTM3Q96MX0 182 aa13.46□□□□□ -0.25
HDDC3-201ENST00000330334 RYR3Q15413 4870 aa13.46□□□□□ -0.26
HDDC3-201ENST00000330334 CGB1A6NKQ9 187 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 UPK2O00526 184 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 TAS2R46P59540 309 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 TAS2R20P59543 309 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 OR2B8PP59922 312 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 HERV-K104P61576 105 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 ADAMTSL5Q6ZMM2 481 aa13.45□□□□□ -0.26
HDDC3-201ENST00000330334 MUC7Q8TAX7 377 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms