RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SRRM4A7MD48 611 aaKnown RBP17.91■□□□□ 0.46
CCDC85B-201ENST00000312579 PSMB6P28072 239 aa17.91■□□□□ 0.46
CCDC85B-201ENST00000312579 KIR2DS2P43631 304 aa17.91■□□□□ 0.46
CCDC85B-201ENST00000312579 Q8N6K4 173 aa17.91■□□□□ 0.46
CCDC85B-201ENST00000312579 DNAJC9-AS1A6NH13 148 aa17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 IGKV1-39P01597 117 aa17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 IGKV1D-39P04432 117 aa17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 RRASP10301 218 aa17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 TAGLNQ01995 201 aaKnown RBP17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 OR4C13Q8NGP0 309 aa17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 HARBI1Q96MB7 349 aa17.9■□□□□ 0.46
CCDC85B-201ENST00000312579 SHOXO15266 292 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 CHST1O43916 411 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 MPC2O95563 127 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 AKR1C2P52895 323 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 TMEM177Q53S58 311 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 THOC7Q6I9Y2 204 aaKnown RBP17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 C11orf87Q6NUJ2 197 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 C9orf62Q8N4C0 152 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 THAP6Q8TBB0 222 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 CD300LFQ8TDQ1 290 aa17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 NIPBLQ6KC79 2804 aaeCLIP17.89■□□□□ 0.45
CCDC85B-201ENST00000312579 RBFOX2O43251 390 aaKnown RBP eCLIP17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 ATG12O94817 140 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 IGLV2-23P01705 113 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 S100A10P60903 97 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 IL15RAQ13261 267 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 NMSQ5H8A3 153 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 SSX9Q7RTT3 188 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 ZNF418Q8TF45 676 aaPredicted RBP17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 PLSCR3Q9NRY6 295 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 HSPB11Q9Y547 144 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 BTBD17A6NE02 478 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 HPRT1P00492 218 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 PET100P0DJ07 73 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 SLC25A4P12235 298 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 SRSF2Q01130 221 aaKnown RBP17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 RAB32Q13637 225 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 MMDQ15546 238 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 DHRS7BQ6IAN0 325 aaPredicted RBP17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 OR5R1Q8NH85 324 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 LSM10Q969L4 123 aaKnown RBP17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 RRNAD1Q96FB5 475 aaKnown RBP17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 SLC25A33Q9BSK2 321 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 VPREB3Q9UKI3 123 aa17.88■□□□□ 0.45
CCDC85B-201ENST00000312579 NCBP2LA6PVI3 153 aaKnown RBP17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 HMSDA8MTL9 139 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 SCGB1D2O95969 90 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 KRASP01116 189 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 G6PCP35575 357 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 LAMTOR1Q6IAA8 161 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 RBM14Q96PK6 669 aaKnown RBP17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 PLEKHA2Q9HB19 425 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 TPSG1Q9NRR2 321 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 MBD2Q9UBB5 411 aa17.87■□□□□ 0.45
CCDC85B-201ENST00000312579 SH2D7A6NKC9 451 aaPredicted RBP17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 ARPC5O15511 151 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 SLC25A17O43808 307 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 IGKV1-5P01602 117 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 PSG5Q15238 335 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 OSR1Q8TAX0 266 aaPredicted RBP17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 GPR146Q96CH1 333 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 R3HDM4Q96D70 268 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 BOLA1Q9Y3E2 137 aa17.86■□□□□ 0.45
CCDC85B-201ENST00000312579 SNAPC5O75971 98 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 OR2F2O95006 317 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 HILS1P60008 231 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 SMCO1Q147U7 214 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 PRSS54Q6PEW0 395 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 FOXRED2Q8IWF2 684 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 OR4D5Q8NGN0 318 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 FBXL15Q9H469 300 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 ZFP57Q9NU63 452 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 LSM5Q9Y4Y9 91 aaKnown RBP17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 POMT1Q9Y6A1 747 aa17.85■□□□□ 0.45
CCDC85B-201ENST00000312579 A0A0G2JRQ6 117 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 A0A1B0GU03 582 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 NBR2O15453 112 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 SAA1P0DJI8 122 aaPredicted RBP17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 SLC25A6P12236 298 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 IZUMO4Q1ZYL8 232 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 TMEM65Q6PI78 240 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 ZNF546Q86UE3 836 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 FAM219AQ8IW50 185 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 TAF15Q92804 592 aaKnown RBP eCLIP17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 RHOVQ96L33 236 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 TSNAXQ99598 290 aaKnown RBP17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 PITPNC1Q9UKF7 332 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 MMP24Q9Y5R2 645 aa17.84■□□□□ 0.45
CCDC85B-201ENST00000312579 L7N2F9 121 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 HRASP01112 189 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 RLN2P04090 185 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 NQO2P16083 231 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 LGALS7P47929 136 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 LGALSLQ3ZCW2 172 aaPredicted RBP17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 TMEM86BQ8N661 226 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 Q8N9W7 124 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 DMBX1Q8NFW5 382 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 NPBQ8NG41 125 aa17.83■□□□□ 0.45
CCDC85B-201ENST00000312579 OR1S1Q8NH92 325 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms