RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 OR2A4O95047 310 aa21.55■■□□□ 1.04
HDAC3-201ENST00000305264 PJVKQ0ZLH3 352 aa21.55■■□□□ 1.04
HDAC3-201ENST00000305264 MRGPRG-AS1Q2M3A8 158 aa21.55■■□□□ 1.04
HDAC3-201ENST00000305264 TEX45Q8NA69 505 aa21.55■■□□□ 1.04
HDAC3-201ENST00000305264 OR2A7Q96R45 310 aa21.55■■□□□ 1.04
HDAC3-201ENST00000305264 CLCC1Q96S66 551 aa21.55■■□□□ 1.04
HDAC3-201ENST00000305264 TRAV3A0A0B4J244 114 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 A0A0B4J2A0 478 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 CREBL2O60519 120 aaPredicted RBP21.54■■□□□ 1.04
HDAC3-201ENST00000305264 P0C879 139 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 BLCAPP62952 87 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 RASL11BQ9BPW5 248 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 BET1LQ9NYM9 111 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 SHPKQ9UHJ6 478 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 ALG5Q9Y673 324 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 C7orf66A4D0T2 115 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 M0QZK8 103 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 FCN1O00602 326 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 PPP1R27Q86WC6 154 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 RNASE11Q8TAA1 199 aaKnown RBP21.54■■□□□ 1.04
HDAC3-201ENST00000305264 VSTM2AQ8TAG5 236 aa21.54■■□□□ 1.04
HDAC3-201ENST00000305264 C2CD3Q4AC94 2353 aa21.53■■□□□ 1.04
HDAC3-201ENST00000305264 SNRPGP15A8MWD9 76 aa21.53■■□□□ 1.04
HDAC3-201ENST00000305264 IL6RP08887 468 aaPredicted RBP21.53■■□□□ 1.04
HDAC3-201ENST00000305264 OR9G9P0C7N8 305 aa21.53■■□□□ 1.04
HDAC3-201ENST00000305264 H2BFWTQ7Z2G1 175 aa21.53■■□□□ 1.04
HDAC3-201ENST00000305264 C12orf45Q8N5I9 185 aaPredicted RBP21.53■■□□□ 1.04
HDAC3-201ENST00000305264 TAF15Q92804 592 aaKnown RBP eCLIP21.53■■□□□ 1.04
HDAC3-201ENST00000305264 ZNF430Q9H8G1 570 aaPredicted RBP21.53■■□□□ 1.04
HDAC3-201ENST00000305264 ADAP1O75689 374 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 ATG12O94817 140 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 UXS1Q8NBZ7 420 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 TMEM167AQ8TBQ9 72 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 RRNAD1Q96FB5 475 aaKnown RBP21.52■■□□□ 1.04
HDAC3-201ENST00000305264 NSG2Q9Y328 171 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 MMP24Q9Y5R2 645 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 HOXB5P09067 269 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 NMSQ5H8A3 153 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 Q6ZS46 218 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 LURAP1LQ8IV03 231 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 HSPB9Q9BQS6 159 aa21.52■■□□□ 1.04
HDAC3-201ENST00000305264 DBX1A6NMT0 343 aa21.51■■□□□ 1.03
HDAC3-201ENST00000305264 CA2P00918 260 aa21.51■■□□□ 1.03
HDAC3-201ENST00000305264 VDAC1P21796 283 aa21.51■■□□□ 1.03
HDAC3-201ENST00000305264 PRSS8Q16651 343 aa21.51■■□□□ 1.03
HDAC3-201ENST00000305264 RANBP3Q9H6Z4 567 aaPredicted RBP21.51■■□□□ 1.03
HDAC3-201ENST00000305264 DUXBA0A1W2PPF3 345 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 UPK2O00526 184 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 HLA-DRB1P01911 266 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 SSBP2P81877 361 aaPredicted RBP21.5■■□□□ 1.03
HDAC3-201ENST00000305264 LSM10Q969L4 123 aaKnown RBP21.5■■□□□ 1.03
HDAC3-201ENST00000305264 GPR146Q96CH1 333 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 NPFFR1Q9GZQ6 430 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 OR2B8PP59922 312 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 Q6ZRM9 215 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 OR4A5Q8NH83 315 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 OR51J1Q9H342 316 aa21.5■■□□□ 1.03
HDAC3-201ENST00000305264 TRIM77I1YAP6 450 aa21.49■■□□□ 1.03
HDAC3-201ENST00000305264 RELBQ01201 579 aa21.49■■□□□ 1.03
HDAC3-201ENST00000305264 C9orf152Q5JTZ5 239 aa21.49■■□□□ 1.03
HDAC3-201ENST00000305264 GGNBP1Q5YKI7 109 aa21.49■■□□□ 1.03
HDAC3-201ENST00000305264 CADM3Q8N126 398 aa21.49■■□□□ 1.03
HDAC3-201ENST00000305264 TET2Q6N021 2002 aaPredicted RBP21.49■■□□□ 1.03
HDAC3-201ENST00000305264 MPTX1A8MV57 137 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 MYOD1P15172 320 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 GNB1P62873 340 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 FAM219AQ8IW50 185 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 TMED3Q9Y3Q3 217 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 IGHV7-81A0A0B4J1V7 117 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 CCSO14618 274 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 RPL8P62917 257 aaKnown RBP21.48■■□□□ 1.03
HDAC3-201ENST00000305264 NDPQ00604 133 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 C2orf68Q2NKX9 166 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 MMD2Q8IY49 270 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 ZNF702PQ9H963 129 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 CACNG5Q9UF02 275 aa21.48■■□□□ 1.03
HDAC3-201ENST00000305264 PIGBOS1A0A0B4J2F0 54 aa21.47■■□□□ 1.03
HDAC3-201ENST00000305264 C10orf55Q5SWW7 151 aa21.47■■□□□ 1.03
HDAC3-201ENST00000305264 SSNA1O43805 119 aa21.47■■□□□ 1.03
HDAC3-201ENST00000305264 RPL15P61313 204 aaKnown RBP21.47■■□□□ 1.03
HDAC3-201ENST00000305264 CX3CL1P78423 397 aa21.47■■□□□ 1.03
HDAC3-201ENST00000305264 TNXAQ16473 311 aa21.47■■□□□ 1.03
HDAC3-201ENST00000305264 PRIMA1Q86XR5 153 aa21.47■■□□□ 1.03
HDAC3-201ENST00000305264 LINC01548A6NM66 108 aa21.46■■□□□ 1.03
HDAC3-201ENST00000305264 C15orf61A6NNL5 157 aa21.46■■□□□ 1.03
HDAC3-201ENST00000305264 HLA-GP17693 338 aa21.46■■□□□ 1.03
HDAC3-201ENST00000305264 SNAPC5O75971 98 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 OR4A16Q8NH70 328 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 PRSS22Q9GZN4 317 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 OPN1MWP04001 364 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 CRYBA1P05813 215 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 OPN1MW2P0DN77 364 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 OPN1MW3P0DN78 364 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 TMEM95Q3KNT9 176 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 ZNF562Q6V9R5 426 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 Q6ZSV7 163 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 TMEM14BQ9NUH8 114 aa21.45■■□□□ 1.02
HDAC3-201ENST00000305264 RBMXL2O75526 392 aaKnown RBP21.44■■□□□ 1.02
HDAC3-201ENST00000305264 COMPP49747 757 aaPredicted RBP21.44■■□□□ 1.02
HDAC3-201ENST00000305264 Q6ZNX1 250 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms