RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 MUS81Q96NY9 551 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 FANCD2OSQ96PS1 177 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 RARRES2Q99969 163 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 NDUFA12Q9UI09 145 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 MMP24Q9Y5R2 645 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 THSD7BQ9C0I4 1608 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 DSPPQ9NZW4 1301 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 RBMY1BA6NDE4 496 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 RBMY1EA6NEQ0 496 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 TNFRSF6BO95407 300 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 CA2P00918 260 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 RBMY1DP0C7P1 496 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 RBMY1A1P0DJD3 496 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 RBMY1CP0DJD4 496 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 TGFBR1P36897 503 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 FAM27BQ5VT28 67 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGFL3Q6UXB1 125 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 SIGLEC15Q6ZMC9 328 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 FAM89BQ8N5H3 189 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 TM2D2Q9BX73 214 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 JPT1Q9UK76 154 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 LINC00312Q9Y6C7 94 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGKV1OR2-108A0A075B7D4 117 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 COX5BP10606 129 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 MLLT11Q13015 90 aaPredicted RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 BPIFA4PQ86YQ2 179 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 THAP8Q8NA92 274 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 PPP1R3EQ9H7J1 279 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 HSF4Q9ULV5 492 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 DIMT1Q9UNQ2 313 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 CHCHD2Q9Y6H1 151 aaPredicted RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 ZNF701M0R085 212 aaPredicted RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 BGLAPP02818 100 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 PSG5Q15238 335 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 TMEM41BQ5BJD5 291 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 ODF3L1Q8IXM7 274 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 PIFOQ8TCI5 191 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 MOGAT1Q96PD6 335 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 SLC25A32Q9H2D1 315 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 PLSCR2Q9NRY7 297 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 H3BP45 60 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 J3QL48 77 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGHV1-46P01743 117 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 S100A11P31949 105 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 UBE2E1P51965 193 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 PRSS48Q7RTY5 328 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 NKAPP1Q8N9T2 125 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 GNPNAT1Q96EK6 184 aaPredicted RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 C5orf30Q96GV9 206 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 NXF2Q9GZY0 626 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 GSX1Q9H4S2 264 aaPredicted RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 ADAMTS9Q9P2N4 1935 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 TNFSF18Q9UNG2 199 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 LAMA4Q16363 1823 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 LTBP1Q14766 1721 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 H3BRM9 83 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 LDLRAD4O15165 306 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 SCGB1D1O95968 90 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGLV2-23P01705 113 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGHA1P01876 353 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGHA2P01877 340 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 RPL34P49207 117 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 B2MP61769 119 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 TMEM155Q4W5P6 130 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 DEGS2Q6QHC5 323 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 NDUFA11Q86Y39 141 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 FAM216AQ8WUB2 273 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 TRBV7-1A0A0A6YYK4 115 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 PINLYPA6NC86 204 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 H0YL77 283 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 MFNGO00587 321 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 TRGC1P0CF51 173 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 PGA4P0DJD7 388 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 PGA3P0DJD8 388 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 PTGDSP41222 190 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 IL13RA2Q14627 380 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 LAX1Q8IWV1 398 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 CIARTQ8N365 385 aaPredicted RBP3.81□□□□□ -1.8
CHL1-216ENST00000620033 OR11H4Q8NGC9 324 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 FCRL1Q96LA6 429 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 CNOT2Q9NZN8 540 aaKnown RBP3.81□□□□□ -1.8
CHL1-216ENST00000620033 IGHV3OR16-8A0A075B7F1 116 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 ARPC5O15511 151 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 TSPAN13O95857 204 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 OR9G9P0C7N8 305 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 BTF3P20290 206 aaKnown RBP3.81□□□□□ -1.8
CHL1-216ENST00000620033 DEFB112Q30KQ8 113 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 MOGAT2Q3SYC2 334 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 TPTE2P1Q5T6R2 138 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 ZNF818PQ6ZRF7 136 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 TMEM144Q7Z5S9 345 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 RTN4IP1Q8WWV3 396 aaPredicted RBP3.81□□□□□ -1.8
CHL1-216ENST00000620033 FOXC2Q99958 501 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 MAP1LC3CQ9BXW4 147 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 SCN3AQ9NY46 2000 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 FOCADQ5VW36 1801 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 IGKV3D-20A0A0C4DH25 116 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 NUPR2A6NF83 97 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 M0R2N4 97 aa3.81□□□□□ -1.8
CHL1-216ENST00000620033 NGFRP08138 427 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms