RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 DPM3Q9P2X0 92 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF107Q9UII5 783 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 JPT1Q9UK76 154 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 A0A1W2PRX2 142 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A10PA6NDY2 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A18PA6NE21 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A16PA6NEW6 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A20PA6NIJ5 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A8PA6NJQ4 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A7PA6NKC0 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A22PA8MWA6 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A12PA8MX19 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A5PA8MXJ8 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A23PA8MXZ1 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A15PP0C7V4 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A13PP0C7W8 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A14PP0C7W9 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 FAM90A24PP0C7X0 464 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 TIMP3P35625 211 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF66Q6ZN08 573 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 NR2C2APQ86WQ0 139 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 OR4A5Q8NH83 315 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 TMEM37Q8WXS4 190 aa8.56□□□□□ -1.04
SMARCA1-205ENST00000617310 H0Y980 276 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 ORM1P02763 201 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 CD1BP29016 333 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 SLC35B1P78383 322 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 C1QTNF12Q5T7M4 302 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 OR52M1Q8NGK5 317 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 PLPPR1Q8TBJ4 325 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 NEU4Q8WWR8 484 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 GTF3AQ92664 365 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 SGK494Q96LW2 274 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 NXF2Q9GZY0 626 aaKnown RBP8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 LINC00527Q9UJ94 153 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 TCF19Q9Y242 345 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 OR2A4O95047 310 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 ALX3O95076 343 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV1D-33P01593 117 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV1-33P01594 117 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF474Q6S9Z5 364 aaPredicted RBP8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 WDR82Q6UXN9 313 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 SAXO1Q8IYX7 474 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 OR4C13Q8NGP0 309 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 CXorf58Q96LI9 332 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 OR2A7Q96R45 310 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 CHRDL1Q9BU40 450 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 AUP1Q9Y679 476 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 LRRK1Q38SD2 2015 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 IQCF6A8MYZ5 107 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 IFNL4K9M1U5 179 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV3-20P01619 116 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 IGHV3-11P01762 117 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 MIC13Q5XKP0 118 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 C11orf42Q8N5U0 333 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 POC1AQ8NBT0 407 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 ASB13Q8WXK3 278 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 CBLN4Q9NTU7 201 aa8.55□□□□□ -1.04
SMARCA1-205ENST00000617310 C11orf94C9JXX5 98 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 KBTBD11O94819 623 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 IGHV1-46P01743 117 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 MBPP02686 304 aaPredicted RBP8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 ZNF672Q499Z4 452 aaPredicted RBP8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 PCSK4Q6UW60 755 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 OR4B1Q8NGF8 309 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 TP53RKQ96S44 253 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 SRD5A3Q9H8P0 318 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 IGKV3D-15A0A087WSY6 115 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 LILRA1O75019 489 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 LGALSLQ3ZCW2 172 aaPredicted RBP8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 YLPM1P49750 1951 aaKnown RBP8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 ANAPC1Q9H1A4 1944 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 A0A0G2JK05 382 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 CSN3P07498 182 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 GAS1P54826 345 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 HSPE1P61604 102 aaKnown RBP8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 PAFAH1B2P68402 229 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 NRN1LQ496H8 165 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 C16orf82Q7Z2V1 217 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 RBKSQ9H477 322 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 PLSCR4Q9NRQ2 329 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 PLXNA4Q9HCM2 1894 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 K7EM74 188 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 HYPMO75409 117 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 MOSP00540 346 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 THBDP07204 575 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 MELTFP08582 738 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 SPCS3P61009 180 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 SLC35E4Q6ICL7 350 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 NPIPB3Q92617 1050 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 VOPP1Q96AW1 172 aa8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 QTRT1Q9BXR0 403 aaKnown RBP8.54□□□□□ -1.04
SMARCA1-205ENST00000617310 TRAV40A0A0B4J280 105 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 C17orf98A8MV24 154 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 GATCO43716 136 aaKnown RBP8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 FCER1GP30273 86 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 FCGR2BP31994 310 aaPredicted RBP8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 TMEM186Q96B77 213 aa8.53□□□□□ -1.04
SMARCA1-205ENST00000617310 GHITMQ9H3K2 345 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms