RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 POU2AF1Q16633 256 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 FAM71F2Q6NXP2 309 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 ZNF833PQ6ZTB9 187 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 PRIMA1Q86XR5 153 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 OR4S2Q8NH73 311 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 C8orf46Q8TAG6 207 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 C10orf105Q8TEF2 133 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 TMED6Q8WW62 240 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 GINS3Q9BRX5 216 aa7.68□□□□□ -1.18
VPS25-205ENST00000590339 BORCS7-ASMTA0A0B4J1R7 106 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 A0A1W2PPE3 182 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 MARCH11A6NNE9 402 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 GPR37O15354 613 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 CD5LO43866 347 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 FCGR3BO75015 233 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 CRLF1O75462 422 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 NXPH3O95157 252 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 IGHV3-7P01780 117 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 RBP4P02753 201 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 FAM157CP0CG43 387 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 SLC25A16P16260 332 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 USF1P22415 310 aaPredicted RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 NFYBP25208 207 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 GNG10P50151 68 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 SULT1A2P50226 295 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 CAV2P51636 162 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 ZNF137PP52743 207 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 RPL23AP62750 156 aaKnown RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 NHLH2Q02577 135 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 LOXL1Q08397 574 aaPredicted RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 AANATQ16613 207 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 TMEM249Q2WGJ8 235 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 PDLIM3Q53GG5 364 aaPredicted RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 EIF5AL1Q6IS14 154 aaKnown RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 HSD17B13Q7Z5P4 300 aaPredicted RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 C11orf42Q8N5U0 333 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 EIF4E3Q8N5X7 224 aaKnown RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 ZNF383Q8NA42 475 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 H1FXQ92522 213 aaKnown RBP7.67□□□□□ -1.18
VPS25-205ENST00000590339 RAB39BQ96DA2 213 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 SMIM8Q96KF7 97 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 SMIM3Q9BZL3 60 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 PLA2G2EQ9NZK7 142 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 PRELID3BQ9Y3B1 194 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 CSPG4Q6UVK1 2322 aa7.67□□□□□ -1.18
VPS25-205ENST00000590339 A0A096LNT2 108 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 MED6O75586 246 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 KRASP01116 189 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 FGF2P09038 288 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 OR9G9P0C7N8 305 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 SEC11BP0C7V7 166 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 SPP1P10451 314 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 SULT1A1P50225 295 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 UBE2KP61086 200 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 TOR2AQ5JU69 321 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 CYB5R2Q6BCY4 276 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 DHRS7BQ6IAN0 325 aaPredicted RBP7.66□□□□□ -1.18
VPS25-205ENST00000590339 H2BFWTQ7Z2G1 175 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 HAPLN4Q86UW8 402 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 LYG1Q8N1E2 194 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 RNF141Q8WVD5 230 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 SAT2Q96F10 170 aaPredicted RBP7.66□□□□□ -1.18
VPS25-205ENST00000590339 NEIL1Q96FI4 390 aaPredicted RBP7.66□□□□□ -1.18
VPS25-205ENST00000590339 CITED4Q96RK1 184 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 S1PR3Q99500 378 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 PIMREGQ9BSJ6 248 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 RBKSQ9H477 322 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.66□□□□□ -1.18
VPS25-205ENST00000590339 MIOXQ9UGB7 285 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 PFDN2Q9UHV9 154 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 SESN1Q9Y6P5 492 aa7.66□□□□□ -1.18
VPS25-205ENST00000590339 NF1P21359 2839 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 IGHV4-61A0A0C4DH41 118 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 A8MXK9 166 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 ARG1P05089 322 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 CT45A6P0DMU7 189 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 CT45A5P0DMU8 189 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 CT45A7P0DMV0 189 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 IGHV1-8P0DP01 117 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 IGHV4-31P0DP07 118 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 IAPPP10997 89 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 NQO2P16083 231 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 YLPM1P49750 1951 aaKnown RBP7.65□□□□□ -1.18
VPS25-205ENST00000590339 DYNLT3P51808 116 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 ZNF266Q14584 549 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 AVPI1Q5T686 147 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 WDR25Q64LD2 544 aaPredicted RBP7.65□□□□□ -1.18
VPS25-205ENST00000590339 TMEM14EPQ6UXP3 125 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 STX12Q86Y82 276 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 LY6G5BQ8NDX9 201 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 OR8B3Q8NGG8 313 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 OR5C1Q8NGR4 320 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 ST6GALNAC6Q969X2 333 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 OR8B2Q96RD0 313 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 ATP5SQ99766 215 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 BPESC1Q9GZL8 116 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 CHODLQ9H9P2 273 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 PSENENQ9NZ42 101 aa7.65□□□□□ -1.18
VPS25-205ENST00000590339 ZNRD1Q9P1U0 126 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms