RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 FAM103A1Q9BTL3 118 aaKnown RBP16.92■□□□□ 0.3
NME3-210ENST00000567271 A3GALT2U3KPV4 340 aa16.92■□□□□ 0.3
NME3-210ENST00000567271 M0QYG6 137 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 CTDSPLO15194 276 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 CD3DP04234 171 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 TNFSF8P32971 234 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 GNB1P62873 340 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 CATR1Q13166 79 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 AKIRIN2Q53H80 203 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 IDO2Q6ZQW0 420 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 C18orf65Q6ZTR6 163 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 SPAG16Q8N0X2 631 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 TCTEX1D1Q8N7M0 179 aa16.91■□□□□ 0.3
NME3-210ENST00000567271 TINAGL1Q9GZM7 467 aaPredicted RBP16.91■□□□□ 0.3
NME3-210ENST00000567271 RAMP3O60896 148 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 CNIH1O95406 144 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 SAA1P0DJI8 122 aaPredicted RBP16.9■□□□□ 0.3
NME3-210ENST00000567271 TBPP20226 339 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 SLC6A1P30531 599 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 SSBP1Q04837 148 aaKnown RBP16.9■□□□□ 0.3
NME3-210ENST00000567271 PRSS8Q16651 343 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 TMEM229BQ8NBD8 167 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 LFNGQ8NES3 379 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 SMIM4Q8WVI0 70 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 SOSTQ9BQB4 213 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 KLK15Q9H2R5 256 aa16.9■□□□□ 0.3
NME3-210ENST00000567271 RBFOX2O43251 390 aaKnown RBP eCLIP16.89■□□□□ 0.292e-10■■□□□ 12.7
NME3-210ENST00000567271 SOX15O60248 233 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 PGLYRP1O75594 196 aaPredicted RBP16.89■□□□□ 0.29
NME3-210ENST00000567271 CDX1P47902 265 aaPredicted RBP16.89■□□□□ 0.29
NME3-210ENST00000567271 RNASE10Q5GAN6 216 aaKnown RBP16.89■□□□□ 0.29
NME3-210ENST00000567271 AADACL3Q5VUY0 350 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 LPCAT3Q6P1A2 487 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 TMEM65Q6PI78 240 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 UNQ5815/PRO19632Q6UWF5 114 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 ZNF695Q8IW36 515 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 VKORC1L1Q8N0U8 176 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 KLHL30-AS1Q8NEE0 82 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 GRPEL2Q8TAA5 225 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 MYOZ3Q8TDC0 251 aa16.89■□□□□ 0.29
NME3-210ENST00000567271 FOXA2Q9Y261 457 aaPredicted RBP16.89■□□□□ 0.29
NME3-210ENST00000567271 A0A1W2PN81 502 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 FABP12A6NFH5 140 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 NUDT19A8MXV4 375 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 GPR31O00270 319 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 CD74P04233 296 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 IFNA6P05013 189 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 CHRNA7P36544 502 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 UCP3P55916 312 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 TAS2R19P59542 299 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 KIAA0141Q14154 515 aaPredicted RBP16.88■□□□□ 0.29
NME3-210ENST00000567271 C8orf86Q6ZUL3 223 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 CMTM1Q8IZ96 169 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 ARRDC1Q8N5I2 433 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 OR51H1Q8NH63 302 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 RSRP1Q9BUV0 290 aa16.88■□□□□ 0.29
NME3-210ENST00000567271 ZNF430Q9H8G1 570 aaPredicted RBP16.88■□□□□ 0.29
NME3-210ENST00000567271 OR2A4O95047 310 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 HRASP01112 189 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 PF4P02776 101 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 RAB9AP51151 201 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 ETV3LQ6ZN32 361 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 PUSL1Q8N0Z8 303 aaKnown RBP16.87■□□□□ 0.29
NME3-210ENST00000567271 WFDC9Q8NEX5 89 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 OR5M8Q8NGP6 311 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 VSTM2AQ8TAG5 236 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 CD300LFQ8TDQ1 290 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 RHOVQ96L33 236 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 OR2A7Q96R45 310 aa16.87■□□□□ 0.29
NME3-210ENST00000567271 TNCP24821 2201 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 GSTZ1O43708 216 aaPredicted RBP16.86■□□□□ 0.29
NME3-210ENST00000567271 CREBL2O60519 120 aaPredicted RBP16.86■□□□□ 0.29
NME3-210ENST00000567271 HPRT1P00492 218 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 RLN1P04808 185 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 TNXAQ16473 311 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 STEAP1BQ6NZ63 245 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 LHFPL1Q86WI0 220 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 MMD2Q8IY49 270 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 SLC38A6Q8IZM9 456 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 ZNF491Q8N8L2 437 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 POC5Q8NA72 575 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 OR4D10Q8NGI6 311 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 UBE2E2Q96LR5 201 aa16.86■□□□□ 0.29
NME3-210ENST00000567271 NOTCH1P46531 2555 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 KBTBD11O94819 623 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 RAB3DO95716 219 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 TAS2R31P59538 309 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 ASPHD1Q5U4P2 390 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 TMEM167AQ8TBQ9 72 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 DGCR14Q96DF8 476 aaKnown RBP16.85■□□□□ 0.29
NME3-210ENST00000567271 TMEM68Q96MH6 324 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 AIFM2Q9BRQ8 373 aa16.85■□□□□ 0.29
NME3-210ENST00000567271 MSGN1A6NI15 193 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 F2RP25116 425 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 MYCNOSP40205 109 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 PHLDA2Q53GA4 152 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 SSX9Q7RTT3 188 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 CASTOR1Q8WTX7 329 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 C4orf3Q8WVX3 66 aa16.84■□□□□ 0.29
NME3-210ENST00000567271 SRSF12Q8WXF0 261 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms