RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 FGF2P09038 288 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 F2RL1P55085 397 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 TAS2R31P59538 309 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 TEX45Q8NA69 505 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 TAF15Q92804 592 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLN6-208ENST00000567060 MRGPRFQ96AM1 343 aa13.27□□□□□ -0.29
CLN6-208ENST00000567060 CLPSL1A2RUU4 121 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 LINC00205P59089 165 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 UBE2KP61086 200 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 RELBQ01201 579 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 POU2AF1Q16633 256 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 PHLDA2Q53GA4 152 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 FBLN7Q53RD9 439 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 LIN54Q6MZP7 749 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 TBC1D26Q86UD7 250 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 OR51H1Q8NH63 302 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 ZNF702PQ9H963 129 aa13.26□□□□□ -0.29
CLN6-208ENST00000567060 H0Y980 276 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 LYRM1O43325 122 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 ATG12O94817 140 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 IGLV2-23P01705 113 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 IGHG2P01859 326 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 NQO2P16083 231 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 BLCAPP62952 87 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 PSG5Q15238 335 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 OR4A5Q8NH83 315 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 LINC01006Q8NI28 216 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 C5orf66Q9H5L9 145 aa13.25□□□□□ -0.29
CLN6-208ENST00000567060 NDUFB6O95139 128 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 BRWD1-AS2P59051 145 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 UBE2MP61081 183 aaKnown RBP13.24□□□□□ -0.29
CLN6-208ENST00000567060 ASAH1Q13510 395 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 PLGLAQ15195 96 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 MZT2BQ6NZ67 158 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 PPP1R27Q86WC6 154 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 FOXRED2Q8IWF2 684 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 GALNT14Q96FL9 552 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 RITA1Q96K30 269 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 RTBDNQ9BSG5 229 aaPredicted RBP13.24□□□□□ -0.29
CLN6-208ENST00000567060 GON7Q9BXV9 100 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 METTL1Q9UBP6 276 aaKnown RBP13.24□□□□□ -0.29
CLN6-208ENST00000567060 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 SIGLEC9Q9Y336 463 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 WNK1Q9H4A3 2382 aa13.24□□□□□ -0.29
CLN6-208ENST00000567060 C3orf85A0A1B0GTC6 90 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 PLA2G10O15496 165 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 SERPINE2P07093 398 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 CRYGBP07316 175 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 VDAC2P45880 294 aaPredicted RBP13.23□□□□□ -0.29
CLN6-208ENST00000567060 DEFA1P59665 94 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 DEFA3P59666 94 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 ERVK-16P61578 105 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 DHODHQ02127 395 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 ARSJQ5FYB0 599 aaPredicted RBP13.23□□□□□ -0.29
CLN6-208ENST00000567060 ZNF562Q6V9R5 426 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 SGPP2Q8IWX5 399 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 RHOVQ96L33 236 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 BET1LQ9NYM9 111 aa13.23□□□□□ -0.29
CLN6-208ENST00000567060 TEX13DA0A0J9YY54 714 aaPredicted RBP13.22□□□□□ -0.29
CLN6-208ENST00000567060 CRYM-AS1A6NIL9 109 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 AP4M1O00189 453 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 SLC25A17O43808 307 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 RAMP3O60896 148 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 OR2A4O95047 310 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 ANXA3P12429 323 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 PI3P19957 117 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 UCP1P25874 307 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 CNTFRP26992 372 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 SLC6A1P30531 599 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 MAS1LP35410 378 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 TMEM128Q5BJH2 165 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 OR2B11Q5JQS5 317 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 PUSL1Q8N0Z8 303 aaKnown RBP13.22□□□□□ -0.29
CLN6-208ENST00000567060 OR2A7Q96R45 310 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 GPHA2Q96T91 129 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 NAA60Q9H7X0 242 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 VSIG4Q9Y279 399 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 RNF114Q9Y508 228 aa13.22□□□□□ -0.29
CLN6-208ENST00000567060 SRRM4A7MD48 611 aaKnown RBP13.21□□□□□ -0.29
CLN6-208ENST00000567060 PEX14O75381 377 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 IGF1P05019 195 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 SAA1P0DJI8 122 aaPredicted RBP13.21□□□□□ -0.29
CLN6-208ENST00000567060 VSIG10L2P0DP72 767 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 BTCP35070 178 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 LPAR6P43657 344 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 CRIP2P52943 208 aaPredicted RBP13.21□□□□□ -0.29
CLN6-208ENST00000567060 SRPXP78539 464 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 ZNF585BQ52M93 769 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 TMEM167AQ8TBQ9 72 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 TMEM68Q96MH6 324 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 TSC22D3Q99576 134 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 OR51J1Q9H342 316 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 PALMDQ9NP74 551 aa13.21□□□□□ -0.29
CLN6-208ENST00000567060 SERTAD4Q9NUC0 356 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms