RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PITX3O75364 302 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SNRNP200O75643 2136 aaKnown RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 WNT2P09544 360 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 PGA4P0DJD7 388 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 PGA3P0DJD8 388 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ACKR3P25106 362 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 S100A2P29034 98 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SSR4P51571 173 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM50BP56557 158 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 RND3P61587 244 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 HIST1H3AP68431 136 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 FABP9Q0Z7S8 132 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 NSDHLQ15738 373 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM176BQ3YBM2 270 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 C10orf128Q5T292 105 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 HIST2H3PS2Q5TEC6 136 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SPINK14Q6IE38 97 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 C12orf54Q6X4T0 127 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ASCL4Q6XD76 172 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 Q6ZTC4 211 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ABHD12BQ7Z5M8 362 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SLC35E3Q7Z769 313 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF100Q8IYN0 542 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TEX29Q8N6K0 151 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR8B12Q8NGG6 310 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR4A16Q8NH70 328 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 NANPQ8TBE9 248 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR51E1Q8TCB6 317 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 IL22RA2Q969J5 263 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 GMPPAQ96IJ6 420 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ARHGAP5-AS1Q96IT6 56 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 AKR1E2Q96JD6 320 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 CLCC1Q96S66 551 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR11A1Q9GZK7 315 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TOLLIPQ9H0E2 274 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 METTL9Q9H1A3 318 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 LIME1Q9H400 295 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 NIT2Q9NQR4 276 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 BOKQ9UMX3 212 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 LHFPL6Q9Y693 200 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ASPMQ8IZT6 3477 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SMG1Q96Q15 3661 aaKnown RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 LRP5LA4QPB2 252 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 K7N7A8 449 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 M0R036 132 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SOCS1O15524 211 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ADAP1O75689 374 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SERPINA5P05154 406 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SFTPBP07988 381 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SLC25A6P12236 298 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 CRYGSP22914 178 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 BLVRBP30043 206 aaPredicted RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OTX1P32242 354 aaPredicted RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 HTR5AP47898 357 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SULT1A1P50225 295 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 PPT1P50897 306 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ARHGDIBP52566 201 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 AKR1C2P52895 323 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 BIDP55957 195 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF121P58317 390 aaPredicted RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 RAB4BP61018 213 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 AKR1C1Q04828 323 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 KISS1Q15726 138 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ABCA11PQ4W5N1 156 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SOHLH1Q5JUK2 328 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 HEPN1Q6WQI6 88 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF497Q6ZNH5 498 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 STHQ8IWL8 128 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF283Q8N7M2 679 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF565Q8N9K5 539 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SUMF2Q8NBJ7 301 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OR2M7Q8NG81 312 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SPTSSAQ969W0 71 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 CMBLQ96DG6 245 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 C5orf30Q96GV9 206 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 YPEL4Q96NS1 127 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 C19orf24Q9BVV8 132 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SCRT1Q9BWW7 348 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 PTGES2Q9H7Z7 377 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SPACA1Q9HBV2 294 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 GPR84Q9NQS5 396 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 YAE1D1Q9NRH1 226 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ANXA10Q9UJ72 324 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 FAM215AQ9Y5M1 114 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 POLQO75417 2590 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OTOGQ6ZRI0 2925 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 NPIPA2E9PIF3 369 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 NPIPA3F8WFD2 350 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 TRAF3IP2O43734 574 aaPredicted RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 RAD51DO75771 328 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 P04436 131 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 HPNP05981 417 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 CTXN2P0C2S0 81 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OR8U9P0C7N5 309 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF728P0DKX0 622 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF43P17038 809 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 MSR1P21757 451 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 GLRA1P23415 457 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms