RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ECI1P42126 302 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 CBX3Q13185 183 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 MRGPRG-AS1Q2M3A8 158 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 TMEM95Q3KNT9 176 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 PHLDA2Q53GA4 152 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 OR2B11Q5JQS5 317 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 IDO2Q6ZQW0 420 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 SPAG16Q8N0X2 631 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 TCTEX1D1Q8N7M0 179 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 OR4S2Q8NH73 311 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 HARBI1Q96MB7 349 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 HSPB9Q9BQS6 159 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 RTBDNQ9BSG5 229 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-222ENST00000520948 SLC2A9Q9NRM0 540 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 SCP2D1Q9UJQ7 156 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 PLXNB1O43157 2135 aa14.3□□□□□ -0.12
VEGFA-222ENST00000520948 RLN1P04808 185 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 CTSDP07339 412 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-222ENST00000520948 PGAM2P15259 253 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 F2RP25116 425 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 CD40LGP29965 261 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 FAUP35544 74 aaKnown RBP14.29□□□□□ -0.12
VEGFA-222ENST00000520948 ZNF585BQ52M93 769 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 C9orf152Q5JTZ5 239 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 ZNF57Q68EA5 555 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-222ENST00000520948 TBC1D26Q86UD7 250 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 TEX45Q8NA69 505 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 OR51H1Q8NH63 302 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 CD300LFQ8TDQ1 290 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 CCDC32Q9BV29 185 aa14.29□□□□□ -0.12
VEGFA-222ENST00000520948 FAM212BQ9NTI7 297 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-222ENST00000520948 METTL1Q9UBP6 276 aaKnown RBP14.29□□□□□ -0.12
VEGFA-222ENST00000520948 IGHV7-81A0A0B4J1V7 117 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 MPPED1O15442 326 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 SLC25A17O43808 307 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 HPRT1P00492 218 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 OPN1MWP04001 364 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 OPN1MW2P0DN77 364 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 OPN1MW3P0DN78 364 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 PI3P19957 117 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 VDAC2P45880 294 aaPredicted RBP14.28□□□□□ -0.12
VEGFA-222ENST00000520948 UBE2KP61086 200 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 TRIQKQ629K1 86 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 SLC35E3Q7Z769 313 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 KLHDC1Q8N7A1 406 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 C5orf66Q9H5L9 145 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 TPSG1Q9NRR2 321 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 MCUBQ9NWR8 336 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 ZNF580Q9UK33 172 aa14.28□□□□□ -0.12
VEGFA-222ENST00000520948 PLA2G10O15496 165 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 IL6RP08887 468 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-222ENST00000520948 S100GP29377 79 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 PIGPP57054 158 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 SSBP2P81877 361 aaPredicted RBP14.27□□□□□ -0.13
VEGFA-222ENST00000520948 POU2AF1Q16633 256 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 SAMD5Q5TGI4 173 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 PPP1R27Q86WC6 154 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 PUSL1Q8N0Z8 303 aaKnown RBP14.27□□□□□ -0.13
VEGFA-222ENST00000520948 OR51J1Q9H342 316 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 PLEKHA2Q9HB19 425 aa14.27□□□□□ -0.13
VEGFA-222ENST00000520948 NAP1L6A6NFF2 107 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 IGF1P05019 195 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 LPAR6P43657 344 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 CX3CL1P78423 397 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 PJVKQ0ZLH3 352 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 ZNF846Q147U1 533 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 VMA21Q3ZAQ7 101 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 KPRPQ5T749 579 aaPredicted RBP14.26□□□□□ -0.13
VEGFA-222ENST00000520948 ZNF562Q6V9R5 426 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 POC5Q8NA72 575 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 C7orf50Q9BRJ6 194 aaKnown RBP14.26□□□□□ -0.13
VEGFA-222ENST00000520948 WDR12Q9GZL7 423 aaKnown RBP14.26□□□□□ -0.13
VEGFA-222ENST00000520948 VSIG4Q9Y279 399 aa14.26□□□□□ -0.13
VEGFA-222ENST00000520948 AP4M1O00189 453 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 HRASP01112 189 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-222ENST00000520948 EGR2P11161 476 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-222ENST00000520948 INPP1P49441 399 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 CRIP2P52943 208 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-222ENST00000520948 TAS2R31P59538 309 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 PLGLAQ15195 96 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 ARSJQ5FYB0 599 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-222ENST00000520948 VKORC1L1Q8N0U8 176 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 CADM3Q8N126 398 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 STPG2Q8N412 459 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 RHOVQ96L33 236 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 NOL4LQ96MY1 436 aaPredicted RBP14.25□□□□□ -0.13
VEGFA-222ENST00000520948 SCGB3A2Q96PL1 93 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 CLCC1Q96S66 551 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 COMMD9Q9P000 198 aa14.25□□□□□ -0.13
VEGFA-222ENST00000520948 ARPC1BO15143 372 aaKnown RBP14.24□□□□□ -0.13
VEGFA-222ENST00000520948 S1PR2O95136 353 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 CA2P00918 260 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 NQO2P16083 231 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 BTCP35070 178 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 NDPQ00604 133 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 FOXRED2Q8IWF2 684 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 CCDC71LQ8N9Z2 235 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 TMEM167AQ8TBQ9 72 aa14.24□□□□□ -0.13
VEGFA-222ENST00000520948 CHPT1Q8WUD6 406 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms