RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 PLGLAQ15195 96 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 MOGAT2Q3SYC2 334 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 OR2G6Q5TZ20 316 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 MEDAGQ5VYS4 303 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 PET117Q6UWS5 81 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 GLDNQ6ZMI3 551 aaPredicted RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 ZNF497Q6ZNH5 498 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 SLC25A48Q6ZT89 311 aaKnown RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 SSX9Q7RTT3 188 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 ZNF429Q86V71 674 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 SYS1Q8N2H4 156 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 STX19Q8N4C7 294 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 RNF152Q8N8N0 203 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 ZFP41Q8N8Y5 198 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 OR52I1Q8NGK6 324 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 MRPS24Q96EL2 167 aaKnown RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 CPNE2Q96FN4 548 aaPredicted RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 MRPL48Q96GC5 212 aaKnown RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 CENPNQ96H22 339 aaPredicted RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 UBE2E2Q96LR5 201 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 OR4C12Q96R67 309 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 FAM110AQ9BQ89 295 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 C2orf88Q9BSF0 95 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 MLST8Q9BVC4 326 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 ST6GALNAC5Q9BVH7 336 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 TMED9Q9BVK6 235 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 MRPL20Q9BYC9 149 aaKnown RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 TOLLIPQ9H0E2 274 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 BANF2Q9H503 90 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 OR2S2Q9NQN1 319 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 PEF1Q9UBV8 284 aaKnown RBP4.23□□□□□ -1.73
SPTA1-209ENST00000498708 DAPK2Q9UIK4 370 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 KCNK7Q9Y2U2 307 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 FBXO7Q9Y3I1 522 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 ORC6Q9Y5N6 252 aa4.23□□□□□ -1.73
SPTA1-209ENST00000498708 PNMA8CA0A1B0GUJ8 204 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 FCN1O00602 326 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 NBR2O15453 112 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 NUPL2O15504 423 aaKnown RBP4.22□□□□□ -1.73
SPTA1-209ENST00000498708 SOX15O60248 233 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 FADS2O95864 444 aaKnown RBP4.22□□□□□ -1.73
SPTA1-209ENST00000498708 MAS1P04201 325 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 CD2P06729 351 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 CTXN2P0C2S0 81 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TRAPPC2P0DI81 140 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TRAPPC2BP0DI82 140 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 IGHV4-30-4P0DP06 118 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 FCGR1AP12314 374 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 ARSBP15848 533 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 BDKRB2P30411 391 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 SNRPGP62308 76 aaKnown RBP4.22□□□□□ -1.73
SPTA1-209ENST00000498708 NDPQ00604 133 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 DEFA5Q01523 94 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 HAGHQ16775 308 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 MPV17LQ2QL34 196 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 MORN2Q502X0 79 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TOR2AQ5JU69 321 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 UNQ5815/PRO19632Q6UWF5 114 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 GLIPR1L1Q6UWM5 242 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 FAM131AQ6UXB0 335 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 ASCL4Q6XD76 172 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 JAGN1Q8N5M9 183 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 OR5H6Q8NGV6 325 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 SETD6Q8TBK2 473 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 MYOZ3Q8TDC0 251 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 GPR148Q8TDV2 347 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TMEM106AQ96A25 262 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 SELENOIQ9C0D9 397 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 FBXL15Q9H469 300 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TAF9BQ9HBM6 251 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 CHMP1AQ9HD42 196 aaPredicted RBP4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TMEM138Q9NPI0 162 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 GSN-AS1Q9NRJ2 163 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 ZNF355PQ9NSJ1 428 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 MRPS28Q9Y2Q9 187 aaKnown RBP4.22□□□□□ -1.73
SPTA1-209ENST00000498708 PEX16Q9Y5Y5 336 aa4.22□□□□□ -1.73
SPTA1-209ENST00000498708 TRAV8-7A0A075B6U6 113 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 A0A0A6YYH2 397 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 LINC00862A6NCI5 91 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 A6NJ64 397 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 H7C2Y5 167 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 HSPA12AO43301 675 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 LANCL1O43813 399 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 SCGB1D1O95968 90 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 LALBAP00709 142 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 HLA-DRB1P01911 266 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 ALPLP05186 524 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 LGALS1P09382 135 aaKnown RBP4.21□□□□□ -1.74
SPTA1-209ENST00000498708 LIMS3P0CW19 117 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 LIMS4P0CW20 117 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 GTF2F2P13984 249 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 GABRB1P18505 474 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 TPPP2P59282 170 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 CX3CL1P78423 397 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 RUNX1Q01196 453 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 PAX5Q02548 391 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 C5orf64Q2M2E5 130 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 RPL39P5Q59GN2 51 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 NHLRC3Q5JS37 347 aa4.21□□□□□ -1.74
SPTA1-209ENST00000498708 DNLZQ5SXM8 178 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms