RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 OR2H1Q9GZK4 316 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 ZNF324O75467 553 aaPredicted RBP9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 NTF3P20783 257 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 OR1B1Q8NGR6 318 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 WDR54Q9H977 334 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 TRAV9-2A0A087WT02 112 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 IGKV1D-13A0A0B4J2D9 117 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 KIR2DS1A0A191URI9 304 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 A6NJY4 79 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 SLC17A3O00476 420 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 IGKV1-13P0DP09 117 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 SRFP11831 508 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 B4GALT1P15291 398 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 KIR2DS4P43632 304 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 RAC3P60763 192 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 PCBD1P61457 104 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 KIR2DS1Q14954 304 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 FAM58AQ8N1B3 248 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 TAF15Q92804 592 aaKnown RBP eCLIP9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 SGCZQ96LD1 299 aa9.74□□□□□ -0.85
SEC61A1-205ENST00000483956 CABIN1Q9Y6J0 2220 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 TMPRSS2O15393 492 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 ARF1P84077 181 aaKnown RBP9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 BVES-AS1Q5T3Y7 98 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 PIGCQ92535 297 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 TNRC6BQ9UPQ9 1833 aaKnown RBP9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 TRBV20OR9-2A0A075B6H5 130 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 C17orf112F2Z3M2 114 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 RAMP3O60896 148 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 IGLC1P0CG04 106 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 NTF4P34130 210 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 ATP5G3P48201 142 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 Q56UQ5 140 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 OR2Y1Q8NGV0 311 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 BORCS7Q96B45 105 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 RAB40CQ96S21 281 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 C1QTNF5Q9BXJ0 243 aa9.73□□□□□ -0.85
SEC61A1-205ENST00000483956 DMDP11532 3685 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 IGHV5-10-1A0A0J9YXX1 117 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 ZNF716A6NP11 495 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 SCTP09683 121 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 TCF24Q7RTU0 167 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 OR10G8Q8NGN5 311 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 OR1K1Q8NGR3 316 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 PRDM14Q9GZV8 571 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 IGHV1-45A0A0A0MS14 117 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 CELA2AP08217 269 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 PATE4P0C8F1 98 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 GATA2P23769 480 aaPredicted RBP9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 FGF12P61328 243 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 PMCHL1Q16048 86 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 C5orf17Q8NAS9 161 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 OR10G9Q8NGN4 311 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 OR10G7Q8NGN6 311 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 IMMP1LQ96LU5 166 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 FOXB1Q99853 325 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 ATP23Q9Y6H3 246 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 A0A1W2PQM1 296 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 SPINK4O60575 86 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 TIMP3P35625 211 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 SSR4P51571 173 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 B3GALT5-AS1P59052 145 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 SCGB2A2Q13296 93 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 ZDHHC23Q8IYP9 409 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 OR4P4Q8NGL7 312 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 CCL28Q9NRJ3 127 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 SMPXQ9UHP9 88 aa9.72□□□□□ -0.85
SEC61A1-205ENST00000483956 SAA2-SAA4A0A096LPE2 208 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 IGKV1-6A0A0C4DH72 117 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 PGLYRP1O75594 196 aaPredicted RBP9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 BCL3P20749 454 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 F2RP25116 425 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 Q6ZRM9 215 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 COLCA1Q6ZS62 124 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 OR10P1Q8NGE3 313 aa9.71□□□□□ -0.85
SEC61A1-205ENST00000483956 H0YJW9 148 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 M0R1X1 148 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 S100GP29377 79 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 OTX2P32243 289 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 HBG1P69891 147 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 HBG2P69892 147 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 IGFBP7Q16270 282 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 ZNF324BQ6AW86 544 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 AAED1Q7RTV5 226 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 FGFBP3Q8TAT2 258 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 AKIRIN1Q9H9L7 192 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 IL36BQ9NZH7 164 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 ABI3Q9P2A4 366 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.86
SEC61A1-205ENST00000483956 COX6A1P12074 109 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 CEACAM16Q2WEN9 425 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 SPANXN5Q5MJ07 72 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 GUSBP11Q6P575 273 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 C19orf35Q6ZS72 473 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms