RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM65Q6PI78 240 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 UNQ5815/PRO19632Q6UWF5 114 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 TEX45Q8NA69 505 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 LFNGQ8NES3 379 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 OR52I2Q8NH67 350 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 CASTOR1Q8WTX7 329 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 C4orf3Q8WVX3 66 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 BORCS5Q969J3 196 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 C6orf62Q9GZU0 229 aaPredicted RBP10.06□□□□□ -0.8
COL5A1-206ENST00000465877 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 CEPT1Q9Y6K0 416 aa10.06□□□□□ -0.8
COL5A1-206ENST00000465877 NOTCH3Q9UM47 2321 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 CTDSP2O14595 271 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 RAMP3O60896 148 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 TPPPO94811 219 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 RLN1P04808 185 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 BRWD1-AS2P59051 145 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 DEFA6Q01524 100 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 TNXAQ16473 311 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 PRSS8Q16651 343 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 BEAN1Q3B7T3 259 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 AKIRIN2Q53H80 203 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 AADACL3Q5VUY0 350 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 PYHIN1Q6K0P9 492 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 DHRS11Q6UWP2 260 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 LYSMD2Q8IV50 215 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 MRPL41Q8IXM3 137 aaKnown RBP10.05□□□□□ -0.8
COL5A1-206ENST00000465877 SPAG16Q8N0X2 631 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 OR5M8Q8NGP6 311 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 OR6F1Q8NGZ6 308 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 OR51H1Q8NH63 302 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 RAX2Q96IS3 184 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 DUX3Q96PT4 197 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 ABHD1Q96SE0 405 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 P2RX4Q99571 388 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 SLIRPQ9GZT3 109 aaKnown RBP10.05□□□□□ -0.8
COL5A1-206ENST00000465877 RBM38Q9H0Z9 239 aaKnown RBP10.05□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF430Q9H8G1 570 aaPredicted RBP10.05□□□□□ -0.8
COL5A1-206ENST00000465877 GNB4Q9HAV0 340 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 KLK11Q9UBX7 282 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 NUBP2Q9Y5Y2 271 aa10.05□□□□□ -0.8
COL5A1-206ENST00000465877 CCDC160A6NGH7 325 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 RBFOX2O43251 390 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL5A1-206ENST00000465877 KBTBD11O94819 623 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 GNRHRP30968 328 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 MYCNOSP40205 109 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 RAB9AP51151 201 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 MRPS10P82664 201 aaKnown RBP10.04□□□□□ -0.8
COL5A1-206ENST00000465877 DGCR2P98153 550 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 FHL3Q13643 280 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 VAX1Q5SQQ9 334 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 MMD2Q8IY49 270 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 VKORC1L1Q8N0U8 176 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 ZNF491Q8N8L2 437 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 VSTM2AQ8TAG5 236 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 C15orf40Q8WUR7 153 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 SRSF12Q8WXF0 261 aaKnown RBP10.04□□□□□ -0.8
COL5A1-206ENST00000465877 RCC1LQ96I51 464 aaKnown RBP10.04□□□□□ -0.8
COL5A1-206ENST00000465877 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 MTFP1Q9UDX5 166 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 VSIG4Q9Y279 399 aa10.04□□□□□ -0.8
COL5A1-206ENST00000465877 GABARAPH6UMI1 98 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 M0QYG6 137 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 CCL24O00175 119 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 IGLL1P15814 213 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 TPPP2P59282 170 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 TSPAN5P62079 268 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 IL18Q14116 193 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 KIAA0141Q14154 515 aaPredicted RBP10.03□□□□□ -0.8
COL5A1-206ENST00000465877 RNASE10Q5GAN6 216 aaKnown RBP10.03□□□□□ -0.8
COL5A1-206ENST00000465877 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
COL5A1-206ENST00000465877 ASPHD1Q5U4P2 390 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 SSX9Q7RTT3 188 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 PUSL1Q8N0Z8 303 aaKnown RBP10.03□□□□□ -0.8
COL5A1-206ENST00000465877 POC5Q8NA72 575 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 SMIM4Q8WVI0 70 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 DIRAS2Q96HU8 199 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 RHOVQ96L33 236 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 PHB2Q99623 299 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 NXF2Q9GZY0 626 aaKnown RBP10.03□□□□□ -0.8
COL5A1-206ENST00000465877 SLA2Q9H6Q3 261 aa10.03□□□□□ -0.8
COL5A1-206ENST00000465877 I3L521 148 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 GPR31O00270 319 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 ACTL6BO94805 426 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 OR2A4O95047 310 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 S1PR2O95136 353 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 HRASP01112 189 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 CD3DP04234 171 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 APELAP0DMC3 54 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 TBPP20226 339 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 CD40LGP29965 261 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 RAB25P57735 213 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 TAS2R31P59538 309 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 RUNX1Q01196 453 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 CMTM1Q8IZ96 169 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 ARRDC1Q8N5I2 433 aa10.02□□□□□ -0.81
COL5A1-206ENST00000465877 MCFD2Q8NI22 146 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms